Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119255

Identifier: 197119255

GI number: 197119255

Start: 3320679

End: 3321023

Strand: Direct

Name: 197119255

Synonym: Gbem_2883

Alternate gene names: NA

Gene position: 3320679-3321023 (Clockwise)

Preceding gene: 197119252

Following gene: 197119256

Centisome position: 71.95

GC content: 55.94

Gene sequence:

>345_bases
ATGAAGAAACAGCAGAAGACGCTGCTAACGGCTCTGTCGGTATGTGCCTTCGCCTTTGCCGCGGCCGCAGGAGCGGACCT
GGCAAAAGCGTCGACGTACCACAAGACCGATTCAGCAGGGGCAGTACCCCTCAAAGACCGGACGGGGAATCTGATACCGG
TCGGCAGCACCACTCCGTACAGCCCGGAAAAAACCTGTGGTACCTGCCACGACACCAGCCTCATAACCCAGGGGTACCAT
TTCCAGCAGGGGAAAGGGTTCTCAAACAGCGACATTAGAGTATCGGACACATACAATACCGCGAAGCCCTGGCTTCTTTC
AGACGGTATGTATGGAAAGTGGTGA

Upstream 100 bases:

>100_bases
AATGACAAAACCCGCTCCATTAGGGGATGCAAAGCCACAAGCCCCGGACCCTCCAGGAGGTTCTGGGTTGCAGGTGAAAC
CAAAAAAGGAGGAAGGACAG

Downstream 100 bases:

>100_bases
CCGCCGTCTTCGGACTCGAGCCAGTTGGCTCGGAAGAGCAATACCAGCAGCACCCAGATGGACAAGACCTCTTACTTCTT
TACCGCCAACTGCGGCGCCT

Product: cytochrome c

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKKQQKTLLTALSVCAFAFAAAAGADLAKASTYHKTDSAGAVPLKDRTGNLIPVGSTTPYSPEKTCGTCHDTSLITQGYH
FQQGKGFSNSDIRVSDTYNTAKPWLLSDGMYGKW

Sequences:

>Translated_114_residues
MKKQQKTLLTALSVCAFAFAAAAGADLAKASTYHKTDSAGAVPLKDRTGNLIPVGSTTPYSPEKTCGTCHDTSLITQGYH
FQQGKGFSNSDIRVSDTYNTAKPWLLSDGMYGKW
>Mature_114_residues
MKKQQKTLLTALSVCAFAFAAAAGADLAKASTYHKTDSAGAVPLKDRTGNLIPVGSTTPYSPEKTCGTCHDTSLITQGYH
FQQGKGFSNSDIRVSDTYNTAKPWLLSDGMYGKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12210; Mature: 12210

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQQKTLLTALSVCAFAFAAAAGADLAKASTYHKTDSAGAVPLKDRTGNLIPVGSTTPY
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCEEECCCCCCC
SPEKTCGTCHDTSLITQGYHFQQGKGFSNSDIRVSDTYNTAKPWLLSDGMYGKW
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKKQQKTLLTALSVCAFAFAAAAGADLAKASTYHKTDSAGAVPLKDRTGNLIPVGSTTPY
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCEEECCCCCCC
SPEKTCGTCHDTSLITQGYHFQQGKGFSNSDIRVSDTYNTAKPWLLSDGMYGKW
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA