Click here to switch to the map view.

The map label for this gene is zntR [H]

Identifier: 197119217

GI number: 197119217

Start: 3274004

End: 3274408

Strand: Direct

Name: zntR [H]

Synonym: Gbem_2844

Alternate gene names: 197119217

Gene position: 3274004-3274408 (Clockwise)

Preceding gene: 197119190

Following gene: 197119219

Centisome position: 70.94

GC content: 54.81

Gene sequence:

>405_bases
ATGAACCAATTGAGGCAAGGCGAGACGGCGGTGGGGATAGGAGACCTGGCGAAAGAGTACGGGCTGACCACCAGGACTCT
GCGTTACTGGGAAGAAGTGGGAATCATAGAATCGCTGCAGCGGCAGGACGGCGCCACTCGTGAATTCACCCCCTATTACT
TCAGAAGGATCAAATTCATTCTGCGGCTGAAGGAGCTGGGACTAAGCATCCGCGAGATGCAGGACCTTTATCTCGCCTAT
GGCGAGGCGAAGAGCACGGAGAGAATGATCCCGCGTCTGATCGAGATTCTGGACCAGCATACCGATAAGGTTGATGGGAA
AATGGCGCAGCTGGCTTCGCTTCGGAAGGAAATCGTGGAATACCGGCAAAAGATGCTGACGCGCCTTGCGCCGGAACCAT
ATTAG

Upstream 100 bases:

>100_bases
GAGTAACTCCCCGTTTTAGGGAACCGTTCTGCATACTCTGTTGACAAAACTGAAGGGATGGTCTAAAAGTGGGCCTCAGA
ACTTTACGTAAAGGTAAACC

Downstream 100 bases:

>100_bases
GGCAGCACCGTCCGGTTAGCTGTTGCATTTGCCGAACGAATCCCCCTGCCCTAGCCGAGGGTGAAGTAGAAGGTCGCCCC
TTTGCCGGGTTCGCTCTCGG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNQLRQGETAVGIGDLAKEYGLTTRTLRYWEEVGIIESLQRQDGATREFTPYYFRRIKFILRLKELGLSIREMQDLYLAY
GEAKSTERMIPRLIEILDQHTDKVDGKMAQLASLRKEIVEYRQKMLTRLAPEPY

Sequences:

>Translated_134_residues
MNQLRQGETAVGIGDLAKEYGLTTRTLRYWEEVGIIESLQRQDGATREFTPYYFRRIKFILRLKELGLSIREMQDLYLAY
GEAKSTERMIPRLIEILDQHTDKVDGKMAQLASLRKEIVEYRQKMLTRLAPEPY
>Mature_134_residues
MNQLRQGETAVGIGDLAKEYGLTTRTLRYWEEVGIIESLQRQDGATREFTPYYFRRIKFILRLKELGLSIREMQDLYLAY
GEAKSTERMIPRLIEILDQHTDKVDGKMAQLASLRKEIVEYRQKMLTRLAPEPY

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15775; Mature: 15775

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLRQGETAVGIGDLAKEYGLTTRTLRYWEEVGIIESLQRQDGATREFTPYYFRRIKFI
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LRLKELGLSIREMQDLYLAYGEAKSTERMIPRLIEILDQHTDKVDGKMAQLASLRKEIVE
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQKMLTRLAPEPY
HHHHHHHHCCCCCC
>Mature Secondary Structure
MNQLRQGETAVGIGDLAKEYGLTTRTLRYWEEVGIIESLQRQDGATREFTPYYFRRIKFI
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LRLKELGLSIREMQDLYLAYGEAKSTERMIPRLIEILDQHTDKVDGKMAQLASLRKEIVE
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQKMLTRLAPEPY
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]