| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119190
Identifier: 197119190
GI number: 197119190
Start: 3244432
End: 3244890
Strand: Direct
Name: 197119190
Synonym: Gbem_2817
Alternate gene names: NA
Gene position: 3244432-3244890 (Clockwise)
Preceding gene: 197119189
Following gene: 197119217
Centisome position: 70.3
GC content: 62.31
Gene sequence:
>459_bases ATGAAGAAAAGCGCCGGGCTCGTCATGTACCGCTTCAAAGATGAGCAACTGGAACTTTTCCTGGTGCACCCCGGGGGGCC TTTCTGGGCCGGGAAAGACGAGGGAGCCTGGTCCATCCCCAAGGGGGAGTACCTCCCCGGCGAGGACCCTTTCGAAGTGG CCCGGCGCGAGTTTCTGGAGGAGACCGGGCTTGTTGCTGAGGGGGAGTTCCTGGAACTTTCCGAGATCCGGCAGCCCGGC GGCAAAAAAGTGAAGGCCTGGGCCTTTGCCGGGGACTGCGACCCCTCCGCCATCACCAGCAACACCTTCTCCCTGGAATG GCCGCCTCGCTCCGGGCGATTTGCCGAGTTCCCCGAGGTGGACCGGGCAGGCTGGTTCGAGTCCGGGGCCGCCAGGGTGA AGATACTCAAAGGACAGCTGCCGCTAATAGAGGAACTCTGCCTGCTCATCAATTCTTAG
Upstream 100 bases:
>100_bases AACGCGGTGAACCTCACCGTCTCCGCCGCCACCGTGATAGCCATAAGGTGCGCCGCCCTGGTCAAAGGATGGCAGCTGCC GCGCGGCCAGGCCCATTGAC
Downstream 100 bases:
>100_bases GACCAGACCCGCCGCAGCAACCGAAACGACGAAGGCGGCCCCCACACGGGCCGCCTTCTTTACTTCCATCCAGCGCTTCA CCTCATGCCTCCCTATCGGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT-Like Protein; MutT/Nudix Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase Protein; NUDIX Hydrolase Family Protein; MutT/NUDIX Family Protein; NUDIX Domain-Contain Protein; NTP Pyrophosphohydrolase; MutT Protein; Hydrolase NUDIX Family; MutT-Like Domain-Containing Protein; NUDIX Family Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKKSAGLVMYRFKDEQLELFLVHPGGPFWAGKDEGAWSIPKGEYLPGEDPFEVARREFLEETGLVAEGEFLELSEIRQPG GKKVKAWAFAGDCDPSAITSNTFSLEWPPRSGRFAEFPEVDRAGWFESGAARVKILKGQLPLIEELCLLINS
Sequences:
>Translated_152_residues MKKSAGLVMYRFKDEQLELFLVHPGGPFWAGKDEGAWSIPKGEYLPGEDPFEVARREFLEETGLVAEGEFLELSEIRQPG GKKVKAWAFAGDCDPSAITSNTFSLEWPPRSGRFAEFPEVDRAGWFESGAARVKILKGQLPLIEELCLLINS >Mature_152_residues MKKSAGLVMYRFKDEQLELFLVHPGGPFWAGKDEGAWSIPKGEYLPGEDPFEVARREFLEETGLVAEGEFLELSEIRQPG GKKVKAWAFAGDCDPSAITSNTFSLEWPPRSGRFAEFPEVDRAGWFESGAARVKILKGQLPLIEELCLLINS
Specific function: Unknown
COG id: COG4119
COG function: function code LR; Predicted NTP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16963; Mature: 16963
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSAGLVMYRFKDEQLELFLVHPGGPFWAGKDEGAWSIPKGEYLPGEDPFEVARREFLE CCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH ETGLVAEGEFLELSEIRQPGGKKVKAWAFAGDCDPSAITSNTFSLEWPPRSGRFAEFPEV HCCCCCCCCEEEHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC DRAGWFESGAARVKILKGQLPLIEELCLLINS CCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MKKSAGLVMYRFKDEQLELFLVHPGGPFWAGKDEGAWSIPKGEYLPGEDPFEVARREFLE CCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH ETGLVAEGEFLELSEIRQPGGKKVKAWAFAGDCDPSAITSNTFSLEWPPRSGRFAEFPEV HCCCCCCCCEEEHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC DRAGWFESGAARVKILKGQLPLIEELCLLINS CCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA