| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119219
Identifier: 197119219
GI number: 197119219
Start: 3276329
End: 3276826
Strand: Direct
Name: 197119219
Synonym: Gbem_2846
Alternate gene names: NA
Gene position: 3276329-3276826 (Clockwise)
Preceding gene: 197119217
Following gene: 197119220
Centisome position: 70.99
GC content: 62.85
Gene sequence:
>498_bases GTGCCTACTTCGACTGTACTGAAAGCTTGTGACGAGATGCAACCGGAAATAGATTTAAGCGGCGAGGCCGGTTGGACCCC TTTCGACGCACCCGCACTGGTGGGGGATTCGCTCCGCTTTGTCTCCGGCGACAGAAGCGGAGACCGCTTCCGGGCCCGCT ACTACCGCGACGCCGACAATCATCTCCACGCCAGGTTCTGGCTTGGCCCCGAAGCCGAAGGCCCCCCGGGGCATGCACAC GGCGGCGCAGTCGCAGCGATCATGGACGAGGCGCTCGGGTTGGCGGGATGGGCCGAGGGGTACTCCATCGTAGTGGGAAA CCTGAACGTCAGCTTCCGTAACATGCTCCCCTTGGGGAGGGTGATCACCGTGGAAAGCAGGGTCGTCTCCGTCGAAGGGC GCAAGATCATGGTGCACGGCCGCATCTTCTGCGGCGACACGACCTATGCCGAGGCGCAATGCCTCTGCATCACCATCCCC GGCATCCCAGGCAAATAA
Upstream 100 bases:
>100_bases CCATCCGGCCCGGGCCGCGTCCCCCCTTTATTTCCCGGGCGAAATCTGATAAGGTACCGCCACGTTAATGTATACAAAAA CATCCTAAGGAGAAATCGCA
Downstream 100 bases:
>100_bases ATCTCCGTACCTGCGGTGGCGCGAGCCGTCACCGCAGGTTTTGCTTTGTACTTCCCTCAACTGAACAACCTTTTCCTCAC CGACAATCTTTCAGATCTGC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPTSTVLKACDEMQPEIDLSGEAGWTPFDAPALVGDSLRFVSGDRSGDRFRARYYRDADNHLHARFWLGPEAEGPPGHAH GGAVAAIMDEALGLAGWAEGYSIVVGNLNVSFRNMLPLGRVITVESRVVSVEGRKIMVHGRIFCGDTTYAEAQCLCITIP GIPGK
Sequences:
>Translated_165_residues MPTSTVLKACDEMQPEIDLSGEAGWTPFDAPALVGDSLRFVSGDRSGDRFRARYYRDADNHLHARFWLGPEAEGPPGHAH GGAVAAIMDEALGLAGWAEGYSIVVGNLNVSFRNMLPLGRVITVESRVVSVEGRKIMVHGRIFCGDTTYAEAQCLCITIP GIPGK >Mature_164_residues PTSTVLKACDEMQPEIDLSGEAGWTPFDAPALVGDSLRFVSGDRSGDRFRARYYRDADNHLHARFWLGPEAEGPPGHAHG GAVAAIMDEALGLAGWAEGYSIVVGNLNVSFRNMLPLGRVITVESRVVSVEGRKIMVHGRIFCGDTTYAEAQCLCITIPG IPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI76159293, Length=108, Percent_Identity=35.1851851851852, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17757; Mature: 17626
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSTVLKACDEMQPEIDLSGEAGWTPFDAPALVGDSLRFVSGDRSGDRFRARYYRDADN CCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCEEEEEECCCCC HLHARFWLGPEAEGPPGHAHGGAVAAIMDEALGLAGWAEGYSIVVGNLNVSFRNMLPLGR CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEHHCCCCCCE VITVESRVVSVEGRKIMVHGRIFCGDTTYAEAQCLCITIPGIPGK EEEEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure PTSTVLKACDEMQPEIDLSGEAGWTPFDAPALVGDSLRFVSGDRSGDRFRARYYRDADN CHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCEEEEEECCCCC HLHARFWLGPEAEGPPGHAHGGAVAAIMDEALGLAGWAEGYSIVVGNLNVSFRNMLPLGR CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEHHCCCCCCE VITVESRVVSVEGRKIMVHGRIFCGDTTYAEAQCLCITIPGIPGK EEEEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA