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The map label for this gene is yadS [H]

Identifier: 197119189

GI number: 197119189

Start: 3243813

End: 3244430

Strand: Direct

Name: yadS [H]

Synonym: Gbem_2816

Alternate gene names: 197119189

Gene position: 3243813-3244430 (Clockwise)

Preceding gene: 197119188

Following gene: 197119190

Centisome position: 70.29

GC content: 64.72

Gene sequence:

>618_bases
ATGAACAACCAAGCCATCATCTACGCGTTCGACCTGCTCGGCACGGTCGCCTTTGCCGCCTCGGGAGCGCTGGCGGGAGT
CCGCCGCGGCATGGACCTCCTGGGCGTCATCGTCCTGGGGATCGTGACCGCGACCGGCGGCGGCGTCATGCGCGACGTCC
TCCTGAACGACACCCCTCCCTTTTGCTTTAAGAATGAGCTGTACCTCTACCTCGCCGTGGCGGCATCCGTGGTGGTCTTT
CTCACCCCCAGGAGCTTCGAGAGGATGAACCGGGCCATGCTGCTCCTGGACGCCTTGGGCCTTGGGACCTTCCTGGTCAT
CGGCACCTCCAAGGCGCTCCAGTTCAACCTGGGGCTCATGGGGGCGATCATCATGGGGGTGATGACCGCCACCTGCGGCG
GATTGGTGCGCGACCTTTTGAGCAACCAGATCCCGCTCATCCTGCAGCGCGAGATCTACGCCTCGGCATGCGTCGTCGGC
GGCGCCCTCTTCTACTTCCTCCATTTCACCGAGGTCCCCAACGCGGTGAACCTCACCGTCTCCGCCGCCACCGTGATAGC
CATAAGGTGCGCCGCCCTGGTCAAAGGATGGCAGCTGCCGCGCGGCCAGGCCCATTGA

Upstream 100 bases:

>100_bases
CCCTTCCTGCTTCCTGGCGCGATCCCCCTGCTCTTGCAGCAGGAGGCCTTCAACGGCATCCCTCCCGAGACCGATCCCCA
AGGACAGGAACCTTAACGAA

Downstream 100 bases:

>100_bases
CATGAAGAAAAGCGCCGGGCTCGTCATGTACCGCTTCAAAGATGAGCAACTGGAACTTTTCCTGGTGCACCCCGGGGGGC
CTTTCTGGGCCGGGAAAGAC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNNQAIIYAFDLLGTVAFAASGALAGVRRGMDLLGVIVLGIVTATGGGVMRDVLLNDTPPFCFKNELYLYLAVAASVVVF
LTPRSFERMNRAMLLLDALGLGTFLVIGTSKALQFNLGLMGAIIMGVMTATCGGLVRDLLSNQIPLILQREIYASACVVG
GALFYFLHFTEVPNAVNLTVSAATVIAIRCAALVKGWQLPRGQAH

Sequences:

>Translated_205_residues
MNNQAIIYAFDLLGTVAFAASGALAGVRRGMDLLGVIVLGIVTATGGGVMRDVLLNDTPPFCFKNELYLYLAVAASVVVF
LTPRSFERMNRAMLLLDALGLGTFLVIGTSKALQFNLGLMGAIIMGVMTATCGGLVRDLLSNQIPLILQREIYASACVVG
GALFYFLHFTEVPNAVNLTVSAATVIAIRCAALVKGWQLPRGQAH
>Mature_205_residues
MNNQAIIYAFDLLGTVAFAASGALAGVRRGMDLLGVIVLGIVTATGGGVMRDVLLNDTPPFCFKNELYLYLAVAASVVVF
LTPRSFERMNRAMLLLDALGLGTFLVIGTSKALQFNLGLMGAIIMGVMTATCGGLVRDLLSNQIPLILQREIYASACVVG
GALFYFLHFTEVPNAVNLTVSAATVIAIRCAALVKGWQLPRGQAH

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=197, Percent_Identity=39.0862944162437, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87082304, Length=153, Percent_Identity=37.2549019607843, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21724; Mature: 21724

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQAIIYAFDLLGTVAFAASGALAGVRRGMDLLGVIVLGIVTATGGGVMRDVLLNDTPP
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
FCFKNELYLYLAVAASVVVFLTPRSFERMNRAMLLLDALGLGTFLVIGTSKALQFNLGLM
CEECCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCHHEEECHHHH
GAIIMGVMTATCGGLVRDLLSNQIPLILQREIYASACVVGGALFYFLHFTEVPNAVNLTV
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
SAATVIAIRCAALVKGWQLPRGQAH
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNNQAIIYAFDLLGTVAFAASGALAGVRRGMDLLGVIVLGIVTATGGGVMRDVLLNDTPP
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
FCFKNELYLYLAVAASVVVFLTPRSFERMNRAMLLLDALGLGTFLVIGTSKALQFNLGLM
CEECCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCHHEEECHHHH
GAIIMGVMTATCGGLVRDLLSNQIPLILQREIYASACVVGGALFYFLHFTEVPNAVNLTV
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
SAATVIAIRCAALVKGWQLPRGQAH
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA