Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is phoP [H]

Identifier: 197119176

GI number: 197119176

Start: 3232837

End: 3233550

Strand: Direct

Name: phoP [H]

Synonym: Gbem_2803

Alternate gene names: 197119176

Gene position: 3232837-3233550 (Clockwise)

Preceding gene: 197119175

Following gene: 197119183

Centisome position: 70.05

GC content: 62.18

Gene sequence:

>714_bases
GTGGCAAGCAAGGTTCTGCTCGTTGACGACGTAAGCATGTTTATCGAACTCGAGAGGGACTACCTGCAGCTCTCCGCTGT
GACCGTCTTGACCGCGCGCGACGGCGAGGAGGCCTTCAGGATCTGCAGATTGCAGCGGCCGGACCTGGTTTTCATGGACC
TGCACATGCCGATCATGAACGGAGCCGACTGCTGCCGAGAGATCAAGCGCGATAACCGGCTGTCGACCGCCGTGATACTG
ATTACCACCGAAGGGAAAGAGGAGGACCGGCAACTCTGCCTGCAGGCCGGGTGCGACGGCTTCCTCACCAAGCCCCTGGA
CCGCCACGCGTTTTTAGAGGCGGCCCGCAAGCTACTCCCCGCCATCGACCGGCGCGACCGCAGGGTGAACAGCCGCTTGA
ACGTAAAGTTCCGAGCCTTCGGCCTCACCCTTTCGGGGTTCGCCTCCAACCTGAGCCAAAACGGCATGTACGTGGCCGCC
GACGTGGAGCTGGAGGAAGATGCGACCGTAGAGATCATCTTCGCTCTCCCCGACCCCTTCGGCGCCATCATCCAGACCAG
GGCGCGCGTAGCCTGGCTGAACAGCTCCAAGACCAGAAAGAAGCCGGCGCTCCCCCCGGGGTTCGGCATTGAGTTTCTCT
CCATCGCCGAAGGGGAAAGGGAGCAGATCGGCCGCTTCGTGGACAGCCTGGAGCAGACTAGCGCACGAGTTTAG

Upstream 100 bases:

>100_bases
GTCAAGGGAGGGGGAGAGCTGGCCAAAGGGGAGTTTTGCGGAGGCTCGGCTGAAGATGTCGCAAATGAAGTTATGCAATG
AAGTGACAGGGGGAGCGTAA

Downstream 100 bases:

>100_bases
AAAGCTTCTTAAACTCTTCGGTGCCGGCCACGCGCAGCAGTTGGAAGAGCACCGACTCGGTCGAGGTCATGACCACCCCT
GCCGCCGTCATGGTCTTAAT

Product: PilZ domain-containing response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVIL
ITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAA
DVELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV

Sequences:

>Translated_237_residues
MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVIL
ITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAA
DVELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV
>Mature_236_residues
ASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVILI
TTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAAD
VELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV

Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 26606; Mature: 26475

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMN
CCCCEEEEECHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC
GADCCREIKRDNRLSTAVILITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLP
CHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAADVELEEDATVEIIFALPDPF
HHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCH
GAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV
HHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMN
CCCEEEEECHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC
GADCCREIKRDNRLSTAVILITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLP
CHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAADVELEEDATVEIIFALPDPF
HHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCH
GAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV
HHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]