| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yeaZ [H]
Identifier: 197119121
GI number: 197119121
Start: 3178346
End: 3179059
Strand: Reverse
Name: yeaZ [H]
Synonym: Gbem_2748
Alternate gene names: 197119121
Gene position: 3179059-3178346 (Counterclockwise)
Preceding gene: 197119122
Following gene: 197119120
Centisome position: 68.88
GC content: 65.83
Gene sequence:
>714_bases GTGACGGCAGAGGAAAACGACGTGAAGATACTCACCATCGACACCTCCAGCAACTGCTCCTCCGTCTCCTTGAGCGACGG CTCCACCCTTCTGGGCGAGTGCATCCTGGGCGAGGACCGTTCCAATTCCGGGCGCCTGCTGGAATCGGTCTCGGGCCTCT TGAAGGCGGCCAAGCTTACCCCCGAGGGGCTCGACGCTTTCGCGGTCTCCCTAGGGCCTGGCTCCTTCACCGGGGTCCGG GTCGGCATCGCCACGGTGAAGGGGCTTGCCCTGGCCACCGGGAAGCCCGTCGTCGGTTTCTCGTCGCTAGCCATGCTGGC CATGAACCTTCCCTTCAGCTCCCACCCGGTGGCGCCCATGTACGACGCCCGCAAGGGCGAGGTGTACGCCGCGCTTTACC GCTGCGGTTCGCTTCCCGAAACGCTCCGCTCTGACGCGGTTATAGGGCCGAAGGAGTTTCTTTCGGGGATCGTGAAGCCC ACCATCTTCGTGGGCGACGGCGCCGTGCGCTACCGCGAACTGATCGTCTCGACCCTTGGGGAGCTCGCCATCTTTCCCCC TTGGCACGCCAACCTCCCCCGAGCCTGCGCCGGTGCCGTCATCGCGCACGAGGCCGCGCTTTCCGGGAAGTTCACCCCGC TTGCTTTGCTCAACCCCACCTACCTGCGCGCCTCCGAGGCGGAGATCGCCAAACGCCGCCGCGACGGACTTTAA
Upstream 100 bases:
>100_bases GGGCCCGGGAGATCGCCCAGCAGGTTGGGCTCGTGCTCCTGATCGGCCTCATGATGCTCGCCTTCTACAACGACATCGCC CGCATGTTCGCCCAAAAGGC
Downstream 100 bases:
>100_bases CGCCGTTTGGTAGCTGTTGACAGTTCAGTTTTAATGTATTATGTTGTCCCTTCCTTCGTTCTCCTATAACCTCTCTTAAA CACTCTGTTTTTGGCTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVR VGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKP TIFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL
Sequences:
>Translated_237_residues MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVR VGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKP TIFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL >Mature_236_residues TAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVRV GIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPT IFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=232, Percent_Identity=30.1724137931034, Blast_Score=77, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24804; Mature: 24673
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLT CCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC PEGLDAFAVSLGPGSFTGVRVGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPM CCCCCEEEEEECCCCCCCEEEHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC YDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPTIFVGDGAVRYRELIVSTLG CCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH ELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL HHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHCCC >Mature Secondary Structure TAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLT CCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC PEGLDAFAVSLGPGSFTGVRVGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPM CCCCCEEEEEECCCCCCCEEEHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC YDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPTIFVGDGAVRYRELIVSTLG CCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH ELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL HHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]