Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119097

Identifier: 197119097

GI number: 197119097

Start: 3150236

End: 3152035

Strand: Reverse

Name: 197119097

Synonym: Gbem_2724

Alternate gene names: NA

Gene position: 3152035-3150236 (Counterclockwise)

Preceding gene: 197119099

Following gene: 197119095

Centisome position: 68.3

GC content: 60.5

Gene sequence:

>1800_bases
ATGAACTATCGCGTACTGAGGAGGGGGTTACAAGGGATACTGACACTGGGCGTTTTCCTTGCCGCAGGTTGCGGCGGCGG
AGGAGGGGGGGTGACCTCCGGGAACAGCGTACATGGCGTCGTCGCCGACGGTTATCTCGAAAACGCCAGGGTGTTTCTGG
ATCTGAACGACGACAAACAGTTCACTACCGGAGAACCAACCGCCATGACCGCGGTCGACGGCAGCTACACTATTACCGGG
GTCACCGCCGCCCAGCTCGCGGCTCATGCCCTCGTGGTCCGCGCGGAAGCATCCGTCACCAAAAACCACGAGGGGGGTAG
CGCTACCACGCTTACCGACAGCTACGTCCTCTCCACACCACCCAACGCCCCGAAGACAGCCGACGGCCAGGTGGTTATCA
CTCCGCTTACCACGCTGATCCACAACCAGATCGAGACCAACCCGGTGCTGAACGTGGCCGCAGCCGAGGCTGTGGTGAAA
ACCAACCTGGGGGTTGCCGACGCCACCAGCCTTTTCGACGATTTCGTCCAGAAAAAAGGAGCGAGCCTCGAATACGAGAG
GGTGAGCATGGTGGCGCAGGTCGTAGCTTCGGCGATCGGCAGCAACATGACGGCGATCTCGACGGCAGCCCCCACGGCCA
ACCTGAACGACGTCATCAAGATGGTAGTCTCCGAGGTGGTGGCGCAGCTTAACACCATCTCGAGCGAAGTGGACACGGCC
AAAGCCAGCGGCAGCTTCAACCCGACGGCCCTTGCCACCACGGCCGTGACCATCGACACCAGCAATGCGGGAGCGCTGCA
GGCGAGCATAGCGCAGGCGGCGACCGCTCCCGTCGTCGGCTCCTTCCAGACCGCCCTCGGGACCGACGGCTTCTTCTATT
TGGACAGGCAGTACGACTTAGGCACCGTGACCTACGAGTACGGCAAGGTGAAACTCGGCGCCCAAGGTACCGACGGCTAT
GCGCTGACCGAGGAGTTCTTCCGCTACGACACGCTCAATTCGAGCTGGGCCGCAGCGACCGATACCACCAACAACTACGT
CCTCTCCAAAACCGGGTGGGTGCCTGAAGACGACAACGCATCTTCGGGCAAGCTGGTTTTCAATGCCGACGGCACCGCCA
CCTGGACCAACATCCAAACCGGGGACAGCGAGATCATCACGGTGAGCAAGATGGACGTGGCCGGCAAAGGGATCGCGAGC
TTCCTGACCAGACAGAGCTCCCCCATCAACCCGGCAGCCACCTTCCCGGCAGGATCCGAAGCGTACAAGATGACCTTTAC
GCGCAAGAGCGACCACTACTCCGTCTGGCTGGGCGGTTATCCCAACAGCATGCTGATGAACGTCGCCAAGGTCTCCGACA
TCCCTGCCAGGTTCCCGGCCGCAGGCGACCAGCTCTATGGCGGGCTTTACATCGGCAGTTACCTCTCGGTGCGCTTCTCT
GGCTCCGGGACCAGCGGCACTTTGCAGTTCTTCGGGCAGGGGGCACCCCTCAGCCTCGAAGGTACCTGGAAGATAGTCGA
GCCCGTTGCCGGTTATCCGGTGCTGGTGCTTGATGTGCCGCTTAGCTACCGCACCCAATACATGGACTACTCTCCGGAAA
AGATCATCTTTGCTCAGGTGAACGGCTCGATCCGGCAAGGTGAGGCGGAATACGCCAACGTCCCGCGGATGGAGACCGGT
TACAACTTCAATAAGACCGCCTTCGACGCCATAATGTCCAACTTCAACCCTTCCTTGGGGACGACGCTGAAAAAGGCCGT
CAAAACGACGGTTAAGAAGACGGCTCGCAAAAGTTACTAA

Upstream 100 bases:

>100_bases
CTCACTCACTGGTACCGATAGATGTATTCGATCTGCAAATCAAAGGCAGTTCTGCTTCAGGGCCTGCAGGCCCTGAAAGA
ACCCGAGAAAAGGAGAGTCA

Downstream 100 bases:

>100_bases
GCTACTGCTAGTCAGCGAAAAAACCTCCCCGGGGCGTGGCGCCCGGGGAGGTTTTTTTTAGGTGCCGAAGGCGGGTCAGG
CTGCACCCGGTCTCACTTGC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MNYRVLRRGLQGILTLGVFLAAGCGGGGGGVTSGNSVHGVVADGYLENARVFLDLNDDKQFTTGEPTAMTAVDGSYTITG
VTAAQLAAHALVVRAEASVTKNHEGGSATTLTDSYVLSTPPNAPKTADGQVVITPLTTLIHNQIETNPVLNVAAAEAVVK
TNLGVADATSLFDDFVQKKGASLEYERVSMVAQVVASAIGSNMTAISTAAPTANLNDVIKMVVSEVVAQLNTISSEVDTA
KASGSFNPTALATTAVTIDTSNAGALQASIAQAATAPVVGSFQTALGTDGFFYLDRQYDLGTVTYEYGKVKLGAQGTDGY
ALTEEFFRYDTLNSSWAAATDTTNNYVLSKTGWVPEDDNASSGKLVFNADGTATWTNIQTGDSEIITVSKMDVAGKGIAS
FLTRQSSPINPAATFPAGSEAYKMTFTRKSDHYSVWLGGYPNSMLMNVAKVSDIPARFPAAGDQLYGGLYIGSYLSVRFS
GSGTSGTLQFFGQGAPLSLEGTWKIVEPVAGYPVLVLDVPLSYRTQYMDYSPEKIIFAQVNGSIRQGEAEYANVPRMETG
YNFNKTAFDAIMSNFNPSLGTTLKKAVKTTVKKTARKSY

Sequences:

>Translated_599_residues
MNYRVLRRGLQGILTLGVFLAAGCGGGGGGVTSGNSVHGVVADGYLENARVFLDLNDDKQFTTGEPTAMTAVDGSYTITG
VTAAQLAAHALVVRAEASVTKNHEGGSATTLTDSYVLSTPPNAPKTADGQVVITPLTTLIHNQIETNPVLNVAAAEAVVK
TNLGVADATSLFDDFVQKKGASLEYERVSMVAQVVASAIGSNMTAISTAAPTANLNDVIKMVVSEVVAQLNTISSEVDTA
KASGSFNPTALATTAVTIDTSNAGALQASIAQAATAPVVGSFQTALGTDGFFYLDRQYDLGTVTYEYGKVKLGAQGTDGY
ALTEEFFRYDTLNSSWAAATDTTNNYVLSKTGWVPEDDNASSGKLVFNADGTATWTNIQTGDSEIITVSKMDVAGKGIAS
FLTRQSSPINPAATFPAGSEAYKMTFTRKSDHYSVWLGGYPNSMLMNVAKVSDIPARFPAAGDQLYGGLYIGSYLSVRFS
GSGTSGTLQFFGQGAPLSLEGTWKIVEPVAGYPVLVLDVPLSYRTQYMDYSPEKIIFAQVNGSIRQGEAEYANVPRMETG
YNFNKTAFDAIMSNFNPSLGTTLKKAVKTTVKKTARKSY
>Mature_599_residues
MNYRVLRRGLQGILTLGVFLAAGCGGGGGGVTSGNSVHGVVADGYLENARVFLDLNDDKQFTTGEPTAMTAVDGSYTITG
VTAAQLAAHALVVRAEASVTKNHEGGSATTLTDSYVLSTPPNAPKTADGQVVITPLTTLIHNQIETNPVLNVAAAEAVVK
TNLGVADATSLFDDFVQKKGASLEYERVSMVAQVVASAIGSNMTAISTAAPTANLNDVIKMVVSEVVAQLNTISSEVDTA
KASGSFNPTALATTAVTIDTSNAGALQASIAQAATAPVVGSFQTALGTDGFFYLDRQYDLGTVTYEYGKVKLGAQGTDGY
ALTEEFFRYDTLNSSWAAATDTTNNYVLSKTGWVPEDDNASSGKLVFNADGTATWTNIQTGDSEIITVSKMDVAGKGIAS
FLTRQSSPINPAATFPAGSEAYKMTFTRKSDHYSVWLGGYPNSMLMNVAKVSDIPARFPAAGDQLYGGLYIGSYLSVRFS
GSGTSGTLQFFGQGAPLSLEGTWKIVEPVAGYPVLVLDVPLSYRTQYMDYSPEKIIFAQVNGSIRQGEAEYANVPRMETG
YNFNKTAFDAIMSNFNPSLGTTLKKAVKTTVKKTARKSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63089; Mature: 63089

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRVLRRGLQGILTLGVFLAAGCGGGGGGVTSGNSVHGVVADGYLENARVFLDLNDDKQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEECCCEEEEEECCCCC
FTTGEPTAMTAVDGSYTITGVTAAQLAAHALVVRAEASVTKNHEGGSATTLTDSYVLSTP
CCCCCCCEEEEECCCEEEEEHHHHHHHHHHEEEEECCHHCCCCCCCCEEEEECCEEEECC
PNAPKTADGQVVITPLTTLIHNQIETNPVLNVAAAEAVVKTNLGVADATSLFDDFVQKKG
CCCCCCCCCCEEEEEHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
ASLEYERVSMVAQVVASAIGSNMTAISTAAPTANLNDVIKMVVSEVVAQLNTISSEVDTA
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KASGSFNPTALATTAVTIDTSNAGALQASIAQAATAPVVGSFQTALGTDGFFYLDRQYDL
HCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCC
GTVTYEYGKVKLGAQGTDGYALTEEFFRYDTLNSSWAAATDTTNNYVLSKTGWVPEDDNA
CEEEEECCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCC
SSGKLVFNADGTATWTNIQTGDSEIITVSKMDVAGKGIASFLTRQSSPINPAATFPAGSE
CCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
AYKMTFTRKSDHYSVWLGGYPNSMLMNVAKVSDIPARFPAAGDQLYGGLYIGSYLSVRFS
EEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEEEEEEE
GSGTSGTLQFFGQGAPLSLEGTWKIVEPVAGYPVLVLDVPLSYRTQYMDYSPEKIIFAQV
CCCCCCEEEEECCCCCEEECCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEEEEEE
NGSIRQGEAEYANVPRMETGYNFNKTAFDAIMSNFNPSLGTTLKKAVKTTVKKTARKSY
CCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNYRVLRRGLQGILTLGVFLAAGCGGGGGGVTSGNSVHGVVADGYLENARVFLDLNDDKQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEECCCEEEEEECCCCC
FTTGEPTAMTAVDGSYTITGVTAAQLAAHALVVRAEASVTKNHEGGSATTLTDSYVLSTP
CCCCCCCEEEEECCCEEEEEHHHHHHHHHHEEEEECCHHCCCCCCCCEEEEECCEEEECC
PNAPKTADGQVVITPLTTLIHNQIETNPVLNVAAAEAVVKTNLGVADATSLFDDFVQKKG
CCCCCCCCCCEEEEEHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
ASLEYERVSMVAQVVASAIGSNMTAISTAAPTANLNDVIKMVVSEVVAQLNTISSEVDTA
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KASGSFNPTALATTAVTIDTSNAGALQASIAQAATAPVVGSFQTALGTDGFFYLDRQYDL
HCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCC
GTVTYEYGKVKLGAQGTDGYALTEEFFRYDTLNSSWAAATDTTNNYVLSKTGWVPEDDNA
CEEEEECCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCC
SSGKLVFNADGTATWTNIQTGDSEIITVSKMDVAGKGIASFLTRQSSPINPAATFPAGSE
CCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
AYKMTFTRKSDHYSVWLGGYPNSMLMNVAKVSDIPARFPAAGDQLYGGLYIGSYLSVRFS
EEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEEEEEEE
GSGTSGTLQFFGQGAPLSLEGTWKIVEPVAGYPVLVLDVPLSYRTQYMDYSPEKIIFAQV
CCCCCCEEEEECCCCCEEECCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEEEEEE
NGSIRQGEAEYANVPRMETGYNFNKTAFDAIMSNFNPSLGTTLKKAVKTTVKKTARKSY
CCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA