Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197119093

Identifier: 197119093

GI number: 197119093

Start: 3145442

End: 3145705

Strand: Direct

Name: 197119093

Synonym: Gbem_2720

Alternate gene names: NA

Gene position: 3145442-3145705 (Clockwise)

Preceding gene: 197119087

Following gene: 197119094

Centisome position: 68.15

GC content: 60.98

Gene sequence:

>264_bases
ATGGGACAGCCGGCATCGAAATATACGGAGACGGGGAGCCGCTACTACAAGCTGGCGAACCGCGACATCGTCTACCTGAA
GTCCATCCTGGAGGCGTACGAGGGGCTCAACACCATGAGCGCCATCGACGGCAAGCGCGGCCTCATCCGCGTCAGCTTTC
CGCTTTGCTTCGCCGGCGACGTAGAGGCGCTGATGCAGGAGATCGCCAAGGAGATCGAGATCGCCGAGGTGACAAAGGAG
GGTGAGCCGTGCTCGAAACCATAG

Upstream 100 bases:

>100_bases
GAGGCAAGAGCCAAAGAAAATTTGTCTTTTCACTGGCCAAATGATATGTAGATGCGACCCGAAGCGAGGGTCAACCCGAA
GTGGACAGGAGAGCCTGAGA

Downstream 100 bases:

>100_bases
ACGCCGCAGCCATACTGCGCCGCTCCCTCTCCGCCGGCGGCGAGTTCGCCGAGATCTATTACGAGGCCGGCGCCTCTACC
GTGGTCGTCTGCGAGGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MGQPASKYTETGSRYYKLANRDIVYLKSILEAYEGLNTMSAIDGKRGLIRVSFPLCFAGDVEALMQEIAKEIEIAEVTKE
GEPCSKP

Sequences:

>Translated_87_residues
MGQPASKYTETGSRYYKLANRDIVYLKSILEAYEGLNTMSAIDGKRGLIRVSFPLCFAGDVEALMQEIAKEIEIAEVTKE
GEPCSKP
>Mature_86_residues
GQPASKYTETGSRYYKLANRDIVYLKSILEAYEGLNTMSAIDGKRGLIRVSFPLCFAGDVEALMQEIAKEIEIAEVTKEG
EPCSKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9635; Mature: 9504

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQPASKYTETGSRYYKLANRDIVYLKSILEAYEGLNTMSAIDGKRGLIRVSFPLCFAGD
CCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCEEECCC
VEALMQEIAKEIEIAEVTKEGEPCSKP
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GQPASKYTETGSRYYKLANRDIVYLKSILEAYEGLNTMSAIDGKRGLIRVSFPLCFAGD
CCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCEEECCC
VEALMQEIAKEIEIAEVTKEGEPCSKP
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA