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The map label for this gene is yrrO [H]

Identifier: 197119087

GI number: 197119087

Start: 3132203

End: 3133522

Strand: Direct

Name: yrrO [H]

Synonym: Gbem_2714

Alternate gene names: 197119087

Gene position: 3132203-3133522 (Clockwise)

Preceding gene: 197119078

Following gene: 197119093

Centisome position: 67.87

GC content: 62.05

Gene sequence:

>1320_bases
TTGACGGGAAAGAATAGGGAGAAAACAGCAGGGGAAACGGCGGCGGCGCTTGCCGGCTTGGGGCGGAAGCAGCGCCAGGG
ACGGGTAAAGCCCGAGCTTTTGGCGCCTGCGGGGAACATGGAGAAACTGAAGGTCGCCATCCGCTATGGCGCCGACGCGG
TGTACCTGGGGGGGAAATCGTTTGGCCTTAGAAACCTGGCCGGCAACTTCAGCCTCCCCGAACTCTCGCACGCAGTCGAC
TACGCGCACCGGCACGGCGTCAAGGTGTACCTGACCGTCAACGCCTTTGCCGACAACGGCGATTTGATCGAGCTGGAACG
CTACCTGGACGAGATCCGCGAGATCCCCTTCGACGCCCTCATCGCCGCCGACCCCGGCGTCGTGGCGCTGATAGCCGAGC
GCTGCCCAGGCCGCGACATACACCTTTCCACCCAGGCCAACACCACCAACTGGCGCTCCGCCCGCTTCTGGCAGGCCCAG
GGTGTGAAGCGGGTGAATCTCGCCCGCGAGATGTCGCTGGAGCAGATCGCCGAGACGGCGGGGATGTGCAACGAGATCGA
GCTCGAAGTCTTCGTCCACGGCGCCATGTGCATCTCGTATTCGGGGCGCTGCCTCCTCTCCCTGGCCATGACCGGCAGGG
ATGCCAACAAGGGGGAGTGCACCCAGCCCTGCCGTTGGAACTACGCCATCGTAGAGGAGAGCCGTCCCGGGGAGTATTTC
CCCATCCACGAGGACGAAAGCGGCAGCTTCATCTTCAACTCGAAGGATCTCTGCCTGATCGAGCACCTTCCCGAGCTGGT
GGAGAGCGGCGTCCACTCCCTTAAGATAGAGGGGAGGATGAAAGGGATCTACTACGCGGCCAGCGTGATCCGCATCTACC
GCGAGGCGCTGGACAGCTATTGGGAGAACCCGCAAGAATACCGGCTGAACCCGGCGTGGCTGGAGGAGCTGAGCAAGATC
AGCCACCGCGGGTACACCACCGGATTTTTGTTGGGCAAGCCGCGCGACGTGGACCACGAGTACCTCTCGCGTTACGTGAG
GAACTTCGAGTTTGTGGCGCTGGTCGAGGGGGAGGCGCCGCGTGGAGGGACCCTGGTTGCGGTGAGGAACAGGCTGCAGT
TGGGCGACGCCCTGGAGCTCATCGGTCAGGGGACGAGTTTCACTCGGTTCGTTTTGCAGTCGATGGAAGACGAGGACGGC
GTCCCGCTCCAGGTAGCGCACCCAAACCAGCGGGTAGTCCTGAAAGAACTCACCGGAGCCGGGGAATACGATTTGATCAG
AAGAGAAAAACCCGAGAAAACCAAAAGACTAAACCATTAA

Upstream 100 bases:

>100_bases
ATTCGGGGGTTCATTATCGGTCCGGTATGTGCTACGGTGTGCCGTTGCCGCGGGGCGGCGAAACCGGCGCCACACGAGCG
CAGGAGCAAAGGAGCTGAGC

Downstream 100 bases:

>100_bases
CAAGGAGAAAATCTGAGGACATCTGAGACCCCAAAGGCTTTGAGTTAAAACTAAAAACTTAAAAGCTGAAACCTAAAACC
TTTAGCCACGGAGAAAATCT

Product: peptidase U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTGKNREKTAGETAAALAGLGRKQRQGRVKPELLAPAGNMEKLKVAIRYGADAVYLGGKSFGLRNLAGNFSLPELSHAVD
YAHRHGVKVYLTVNAFADNGDLIELERYLDEIREIPFDALIAADPGVVALIAERCPGRDIHLSTQANTTNWRSARFWQAQ
GVKRVNLAREMSLEQIAETAGMCNEIELEVFVHGAMCISYSGRCLLSLAMTGRDANKGECTQPCRWNYAIVEESRPGEYF
PIHEDESGSFIFNSKDLCLIEHLPELVESGVHSLKIEGRMKGIYYAASVIRIYREALDSYWENPQEYRLNPAWLEELSKI
SHRGYTTGFLLGKPRDVDHEYLSRYVRNFEFVALVEGEAPRGGTLVAVRNRLQLGDALELIGQGTSFTRFVLQSMEDEDG
VPLQVAHPNQRVVLKELTGAGEYDLIRREKPEKTKRLNH

Sequences:

>Translated_439_residues
MTGKNREKTAGETAAALAGLGRKQRQGRVKPELLAPAGNMEKLKVAIRYGADAVYLGGKSFGLRNLAGNFSLPELSHAVD
YAHRHGVKVYLTVNAFADNGDLIELERYLDEIREIPFDALIAADPGVVALIAERCPGRDIHLSTQANTTNWRSARFWQAQ
GVKRVNLAREMSLEQIAETAGMCNEIELEVFVHGAMCISYSGRCLLSLAMTGRDANKGECTQPCRWNYAIVEESRPGEYF
PIHEDESGSFIFNSKDLCLIEHLPELVESGVHSLKIEGRMKGIYYAASVIRIYREALDSYWENPQEYRLNPAWLEELSKI
SHRGYTTGFLLGKPRDVDHEYLSRYVRNFEFVALVEGEAPRGGTLVAVRNRLQLGDALELIGQGTSFTRFVLQSMEDEDG
VPLQVAHPNQRVVLKELTGAGEYDLIRREKPEKTKRLNH
>Mature_438_residues
TGKNREKTAGETAAALAGLGRKQRQGRVKPELLAPAGNMEKLKVAIRYGADAVYLGGKSFGLRNLAGNFSLPELSHAVDY
AHRHGVKVYLTVNAFADNGDLIELERYLDEIREIPFDALIAADPGVVALIAERCPGRDIHLSTQANTTNWRSARFWQAQG
VKRVNLAREMSLEQIAETAGMCNEIELEVFVHGAMCISYSGRCLLSLAMTGRDANKGECTQPCRWNYAIVEESRPGEYFP
IHEDESGSFIFNSKDLCLIEHLPELVESGVHSLKIEGRMKGIYYAASVIRIYREALDSYWENPQEYRLNPAWLEELSKIS
HRGYTTGFLLGKPRDVDHEYLSRYVRNFEFVALVEGEAPRGGTLVAVRNRLQLGDALELIGQGTSFTRFVLQSMEDEDGV
PLQVAHPNQRVVLKELTGAGEYDLIRREKPEKTKRLNH

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=419, Percent_Identity=39.3794749403341, Blast_Score=271, Evalue=8e-74,
Organism=Escherichia coli, GI87081910, Length=359, Percent_Identity=32.3119777158774, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789548, Length=322, Percent_Identity=33.8509316770186, Blast_Score=161, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 49199; Mature: 49067

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKNREKTAGETAAALAGLGRKQRQGRVKPELLAPAGNMEKLKVAIRYGADAVYLGGKS
CCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCEECCCCCHHHEEEEEEECCCEEEECCCC
FGLRNLAGNFSLPELSHAVDYAHRHGVKVYLTVNAFADNGDLIELERYLDEIREIPFDAL
CCHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEHHHHHHHHHHHCCCCEE
IAADPGVVALIAERCPGRDIHLSTQANTTNWRSARFWQAQGVKRVNLAREMSLEQIAETA
EECCCCCEEEEEHHCCCCEEEEEECCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHH
GMCNEIELEVFVHGAMCISYSGRCLLSLAMTGRDANKGECTQPCRWNYAIVEESRPGEYF
CCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PIHEDESGSFIFNSKDLCLIEHLPELVESGVHSLKIEGRMKGIYYAASVIRIYREALDSY
CCEECCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
WENPQEYRLNPAWLEELSKISHRGYTTGFLLGKPRDVDHEYLSRYVRNFEFVALVEGEAP
HCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEECCCC
RGGTLVAVRNRLQLGDALELIGQGTSFTRFVLQSMEDEDGVPLQVAHPNQRVVLKELTGA
CCCEEEEECCHHHHCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHCCC
GEYDLIRREKPEKTKRLNH
CCCHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
TGKNREKTAGETAAALAGLGRKQRQGRVKPELLAPAGNMEKLKVAIRYGADAVYLGGKS
CCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCEECCCCCHHHEEEEEEECCCEEEECCCC
FGLRNLAGNFSLPELSHAVDYAHRHGVKVYLTVNAFADNGDLIELERYLDEIREIPFDAL
CCHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEHHHHHHHHHHHCCCCEE
IAADPGVVALIAERCPGRDIHLSTQANTTNWRSARFWQAQGVKRVNLAREMSLEQIAETA
EECCCCCEEEEEHHCCCCEEEEEECCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHH
GMCNEIELEVFVHGAMCISYSGRCLLSLAMTGRDANKGECTQPCRWNYAIVEESRPGEYF
CCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PIHEDESGSFIFNSKDLCLIEHLPELVESGVHSLKIEGRMKGIYYAASVIRIYREALDSY
CCEECCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
WENPQEYRLNPAWLEELSKISHRGYTTGFLLGKPRDVDHEYLSRYVRNFEFVALVEGEAP
HCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEECCCC
RGGTLVAVRNRLQLGDALELIGQGTSFTRFVLQSMEDEDGVPLQVAHPNQRVVLKELTGA
CCCEEEEECCHHHHCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHCCC
GEYDLIRREKPEKTKRLNH
CCCHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]