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The map label for this gene is dctQ [C]

Identifier: 197119037

GI number: 197119037

Start: 3080262

End: 3080921

Strand: Direct

Name: dctQ [C]

Synonym: Gbem_2660

Alternate gene names: 197119037

Gene position: 3080262-3080921 (Clockwise)

Preceding gene: 197119036

Following gene: 197119038

Centisome position: 66.74

GC content: 57.58

Gene sequence:

>660_bases
ATGATGAAATATCTTGATCACCTAGAGGAGGCTATCATCACCTTCCTTATTGGTGCGGCCACCCTGGTCATTTTTCTTTC
GATTCTACATCGTTATGCGGCGGGGCTTCCTATCCCGGGGCTCCAGGACTGGCTGATCGACATCCGGTTCAGCTGGGCTC
AAGAGCTTTGCATTTATATGTTCGTCTGGATGGCTAAGTTCGGGGCCGCCTACGGCGTGCGTTCCGGCATCCATGTGGGG
GTGGACGTTCTGGTGAACAGGCTCCCGGCGGAGTGGCGCACGAAAGGCGTCTTGCTGTCTATTCTCTGCGGCGTCATCTT
TACCGGCATCATCGGCACCCTCGGGGCCACCTTCGTCTGGGAGAACGGTCTTCACTACGCTCTCTTCCATAAGCTGGGCA
TCCCCACGGGAGATGTTCCGGAAGGGCCCATCACGCCGGACCTCGAGTGGCCCACCTGGTTCATTTATTCCGCGGTTCCT
CTGGGCTCCTATCTGATGTGCTTCAGGTTCCTGCAGGTCGGTTGGCGCTTCCTCAAGACAGGAGAGCTGCCGCACAGCCA
CGATGAATCGCACGTAGAGGGCCTTGAGGAAGAAGCCATCGAGCATTCCCCGCTTACCCAGAGCAAACCCGATCTTGCCG
CCGGAGGTACCGCAAAATGA

Upstream 100 bases:

>100_bases
TGCTGCAACCGGCTACACAGCCAACTAATAGCAGCACCGAAAAGGCCGCTGTCCCCGAGGCAGCGGCTTTTTTCCGCCAT
CCGCTCCAGGAGAAGACAAC

Downstream 100 bases:

>100_bases
GTATGGAGAACATCGCAACCTTACCTCTTATGAGCAAGCCCAAGGCCGCCGGGTGGCTGATCGGGATTGCCGCGGCGCTA
CTCGCCGTCGGGTTCATCTA

Product: TRAP proton/dicarboxylate symporter, small membrane protein component

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Subunit; Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport Protein DctQ; TRAP-Type C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; C4-Dicarboxylate Transport System Small Permease Component; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type C4-Dicarboxylate Transporter Small Permease; C4-Dicarboxylate Transporter Small Subunit; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MMKYLDHLEEAIITFLIGAATLVIFLSILHRYAAGLPIPGLQDWLIDIRFSWAQELCIYMFVWMAKFGAAYGVRSGIHVG
VDVLVNRLPAEWRTKGVLLSILCGVIFTGIIGTLGATFVWENGLHYALFHKLGIPTGDVPEGPITPDLEWPTWFIYSAVP
LGSYLMCFRFLQVGWRFLKTGELPHSHDESHVEGLEEEAIEHSPLTQSKPDLAAGGTAK

Sequences:

>Translated_219_residues
MMKYLDHLEEAIITFLIGAATLVIFLSILHRYAAGLPIPGLQDWLIDIRFSWAQELCIYMFVWMAKFGAAYGVRSGIHVG
VDVLVNRLPAEWRTKGVLLSILCGVIFTGIIGTLGATFVWENGLHYALFHKLGIPTGDVPEGPITPDLEWPTWFIYSAVP
LGSYLMCFRFLQVGWRFLKTGELPHSHDESHVEGLEEEAIEHSPLTQSKPDLAAGGTAK
>Mature_219_residues
MMKYLDHLEEAIITFLIGAATLVIFLSILHRYAAGLPIPGLQDWLIDIRFSWAQELCIYMFVWMAKFGAAYGVRSGIHVG
VDVLVNRLPAEWRTKGVLLSILCGVIFTGIIGTLGATFVWENGLHYALFHKLGIPTGDVPEGPITPDLEWPTWFIYSAVP
LGSYLMCFRFLQVGWRFLKTGELPHSHDESHVEGLEEEAIEHSPLTQSKPDLAAGGTAK

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24382; Mature: 24382

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYLDHLEEAIITFLIGAATLVIFLSILHRYAAGLPIPGLQDWLIDIRFSWAQELCIYM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FVWMAKFGAAYGVRSGIHVGVDVLVNRLPAEWRTKGVLLSILCGVIFTGIIGTLGATFVW
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENGLHYALFHKLGIPTGDVPEGPITPDLEWPTWFIYSAVPLGSYLMCFRFLQVGWRFLKT
HCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELPHSHDESHVEGLEEEAIEHSPLTQSKPDLAAGGTAK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKYLDHLEEAIITFLIGAATLVIFLSILHRYAAGLPIPGLQDWLIDIRFSWAQELCIYM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FVWMAKFGAAYGVRSGIHVGVDVLVNRLPAEWRTKGVLLSILCGVIFTGIIGTLGATFVW
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENGLHYALFHKLGIPTGDVPEGPITPDLEWPTWFIYSAVPLGSYLMCFRFLQVGWRFLKT
HCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELPHSHDESHVEGLEEEAIEHSPLTQSKPDLAAGGTAK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA