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The map label for this gene is dctP [H]

Identifier: 197119036

GI number: 197119036

Start: 3079179

End: 3080189

Strand: Direct

Name: dctP [H]

Synonym: Gbem_2659

Alternate gene names: 197119036

Gene position: 3079179-3080189 (Clockwise)

Preceding gene: 197119035

Following gene: 197119037

Centisome position: 66.72

GC content: 59.55

Gene sequence:

>1011_bases
ATGAGTCTCAAAGCATGTCTGAAAGCATTGGCCATGGCAGCAGCGCTCGCCCTACCGCTGAACGCCGTCGCTGCGCCCGC
GCCGATCGTGATCAAGTTCAGCCACGTCGTCGCACAGAACACCCCGAAAGGTCAGGCCGCCGACTACTTCAAGAAAATTG
CCGAAGAACGCACCAAGGGAAGGGTCAAGGTGGAGGTCTACCCGAACAGCCAGCTCTACAAGGACAAGGAAGAGATGGAA
GCGCTGCAGCTTGGCGCCGTGCAGATGCTGGCGCCGTCTCTGGCCAAGTTCGCACCGCTGGGCGTCAGGGAGTTCGAGGT
GTTCGACCTCCCCTTCATCTTCGACAACTATCAGGAGCTGCACAAGGTAACCCAGGGGCCGGTTGGCGCCAAACTCCTCA
AGAAGCTCGAACCGAAGGGGATCATCGGCCTCGCCTACTGGGACAATGGCTTCAAGGTGATGAGCGCCAACAAGCCGCTC
AGGAGCGTTGCCGACTTTAAGGGGCAGAAGATGCGCATTCAGTCCTCCAAGGTGCTCGATTCCCAGATGAGAGCCATGGG
CGCCATCCCGCAGGTCATGGCCTTCTCCGAGGTGTACCAGGCACTGCAGACCGGCGTCGTTAACGGCACCGAAAACCCGC
CGTCCAACCTCTACACCCAGAAGATGCACGAGGTGCAGAAGTACGTCACCCTCTCCGACCACGGCTACCTCGGTTATGCC
GTCATCGTCAACAAGAAGTTCTGGGAAGGGCTGCCGGCAGATATCCGCACCACCCTCACCGCCTGCATGAAGGACGCAAC
GAAATTCGCCAACGACGTCGCCAAGAAGGACAATGACGAAGCTCTCGCCGGGGTGAAAAAATCCGGGCGCTCGCAGCTGA
TCGCCCTGACCCCGCAGGAGCGCGCCGCCTGGAAAAAGGCGATGGACAAGGCGCACAAGGAGAACACCAGCCGCATCGGT
GCCGACATCGTAAAAGAGGTCTATGCTGCAACCGGCTACACAGCCAACTAA

Upstream 100 bases:

>100_bases
CAGCAGCAGATTCCCCCGCACCACTTGCGCGTCGTACCGAGTTCAAGGCGGCAGTCGCCTGGATCAGATAAGGCAGCACA
AAACCCAAGGAGGAACACCT

Downstream 100 bases:

>100_bases
TAGCAGCACCGAAAAGGCCGCTGTCCCCGAGGCAGCGGCTTTTTTCCGCCATCCGCTCCAGGAGAAGACAACATGATGAA
ATATCTTGATCACCTAGAGG

Product: TRAP proton/dicarboxylate symporter, periplasmic C4-dicarboxylate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSLKACLKALAMAAALALPLNAVAAPAPIVIKFSHVVAQNTPKGQAADYFKKIAEERTKGRVKVEVYPNSQLYKDKEEME
ALQLGAVQMLAPSLAKFAPLGVREFEVFDLPFIFDNYQELHKVTQGPVGAKLLKKLEPKGIIGLAYWDNGFKVMSANKPL
RSVADFKGQKMRIQSSKVLDSQMRAMGAIPQVMAFSEVYQALQTGVVNGTENPPSNLYTQKMHEVQKYVTLSDHGYLGYA
VIVNKKFWEGLPADIRTTLTACMKDATKFANDVAKKDNDEALAGVKKSGRSQLIALTPQERAAWKKAMDKAHKENTSRIG
ADIVKEVYAATGYTAN

Sequences:

>Translated_336_residues
MSLKACLKALAMAAALALPLNAVAAPAPIVIKFSHVVAQNTPKGQAADYFKKIAEERTKGRVKVEVYPNSQLYKDKEEME
ALQLGAVQMLAPSLAKFAPLGVREFEVFDLPFIFDNYQELHKVTQGPVGAKLLKKLEPKGIIGLAYWDNGFKVMSANKPL
RSVADFKGQKMRIQSSKVLDSQMRAMGAIPQVMAFSEVYQALQTGVVNGTENPPSNLYTQKMHEVQKYVTLSDHGYLGYA
VIVNKKFWEGLPADIRTTLTACMKDATKFANDVAKKDNDEALAGVKKSGRSQLIALTPQERAAWKKAMDKAHKENTSRIG
ADIVKEVYAATGYTAN
>Mature_335_residues
SLKACLKALAMAAALALPLNAVAAPAPIVIKFSHVVAQNTPKGQAADYFKKIAEERTKGRVKVEVYPNSQLYKDKEEMEA
LQLGAVQMLAPSLAKFAPLGVREFEVFDLPFIFDNYQELHKVTQGPVGAKLLKKLEPKGIIGLAYWDNGFKVMSANKPLR
SVADFKGQKMRIQSSKVLDSQMRAMGAIPQVMAFSEVYQALQTGVVNGTENPPSNLYTQKMHEVQKYVTLSDHGYLGYAV
IVNKKFWEGLPADIRTTLTACMKDATKFANDVAKKDNDEALAGVKKSGRSQLIALTPQERAAWKKAMDKAHKENTSRIGA
DIVKEVYAATGYTAN

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=331, Percent_Identity=29.0030211480363, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36915; Mature: 36784

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKACLKALAMAAALALPLNAVAAPAPIVIKFSHVVAQNTPKGQAADYFKKIAEERTKG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCC
RVKVEVYPNSQLYKDKEEMEALQLGAVQMLAPSLAKFAPLGVREFEVFDLPFIFDNYQEL
CEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHH
HKVTQGPVGAKLLKKLEPKGIIGLAYWDNGFKVMSANKPLRSVADFKGQKMRIQSSKVLD
HHHHCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHCCCCEEEEHHHHHHH
SQMRAMGAIPQVMAFSEVYQALQTGVVNGTENPPSNLYTQKMHEVQKYVTLSDHGYLGYA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEE
VIVNKKFWEGLPADIRTTLTACMKDATKFANDVAKKDNDEALAGVKKSGRSQLIALTPQE
EEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCHH
RAAWKKAMDKAHKENTSRIGADIVKEVYAATGYTAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLKACLKALAMAAALALPLNAVAAPAPIVIKFSHVVAQNTPKGQAADYFKKIAEERTKG
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCC
RVKVEVYPNSQLYKDKEEMEALQLGAVQMLAPSLAKFAPLGVREFEVFDLPFIFDNYQEL
CEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHH
HKVTQGPVGAKLLKKLEPKGIIGLAYWDNGFKVMSANKPLRSVADFKGQKMRIQSSKVLD
HHHHCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHCCCCEEEEHHHHHHH
SQMRAMGAIPQVMAFSEVYQALQTGVVNGTENPPSNLYTQKMHEVQKYVTLSDHGYLGYA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEE
VIVNKKFWEGLPADIRTTLTACMKDATKFANDVAKKDNDEALAGVKKSGRSQLIALTPQE
EEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCHH
RAAWKKAMDKAHKENTSRIGADIVKEVYAATGYTAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]