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The map label for this gene is dctM [C]

Identifier: 197119038

GI number: 197119038

Start: 3080918

End: 3082306

Strand: Direct

Name: dctM [C]

Synonym: Gbem_2661

Alternate gene names: 197119038

Gene position: 3080918-3082306 (Clockwise)

Preceding gene: 197119037

Following gene: 197119039

Centisome position: 66.76

GC content: 59.54

Gene sequence:

>1389_bases
ATGAGTATGGAGAACATCGCAACCTTACCTCTTATGAGCAAGCCCAAGGCCGCCGGGTGGCTGATCGGGATTGCCGCGGC
GCTACTCGCCGTCGGGTTCATCTACGGCAACGTCGGCATCGTCTTTGCGCTTCTTTTGGCGCTGATGCTGACCGGGGTGC
CGGTCTCCATCGCGCTCGGCCTCACCGTTTTGACCTTCCTCTACCTTTTGACCAACGTACCGATCGAGGCGGTCGCGCTC
AAGCTGTTTACCGGGATCGAGAAGTTCGAGATCATGGCCATACCCTTCTTCATCCTTGCTGGCAACTTCCTGACCCATGG
CGGGGTGGCGCGCAAGATGATCGACTTCGCCACCAGCATGATCGGGCACCTGCACGGAGGACTCGCCCTGGCAGGTATCC
TCGCCTGCGCCATGTTCGCCCTTGTCTGCGGGTCGAGCGTTGCCACAGTGGTCGCCATCGGCTCCATCATCCTGCCGGCG
ATGGTGCGGCACGGCTACCCCATGCGCTTCGGAGCCGGGGTCATCGTCTGCGCTGGATCTCTGGGCATCCTCATGCTGCC
GTCTATTCCGAAGGTCATCTACGCCATCTCGACCAACACCTCTATCGGCGCCCTGTTCGTGGCAGGTCTGTTCCCGGGAA
TTCTGCTCACCATCATGCTCTGCGTGGTGACTTGGTACGTGGCGAAGAAGCGCAACTACCCGCGCCTTCCCAAGGCGACC
TGGGCGGAGCGTCTGGTCGCTTTCCGGAAGAGCGTCTGGGGGCTGATGCTGGTGGTCATCATCATCGGCGGCATCTACTC
CGGCGTCTTTACTGCAACTGAAGCGGCTGCGATGTCGGCGGTCTACGCTTTCTTCATCTCGGTCTTCATCTACAAGGACA
TGGGGATGAAGGACGTGCCGCGCGTCCTGCTCAAGTCCGCCAACCTGAGCGCCATGCTGCTGTACATCATCACCAACGCG
GTGCTGTTCTCGTTCCTGATGTCCCATGAGAATATTCCCCAAGCGATGGCCGATTGGATCCTCGGGAAGGACCTGGGCGT
GGTCGCCTTCCTTATCTTCGTGAACCTTGTGCTTTTGCTGGCCGGCAACGTCATGGAGCCGTCGTCGATCATCCTCATCT
TCGCACCGATCCTCTTCCCGGCTGCGATGAAACTTGGCATCGACCCGGTGCACTTCGGCATCCTGATCGACGCCAATATG
GAGGTCGGCCTCTGCCATCCGCCGGTAGGCCTCAACCTGTACGTCGCCAGCGGCATCTCGAGGTTGAGTATCAGTGAGTT
GACCATGGCGGTAATGCCATGGCTCATGACGATGATCGTCTTCCTGATCATCGTCACCTATTGGCCGTCGCTGTCCATCT
GGCTGCCGAAGGTTCTGGGGATGATGTAA

Upstream 100 bases:

>100_bases
GCCACGATGAATCGCACGTAGAGGGCCTTGAGGAAGAAGCCATCGAGCATTCCCCGCTTACCCAGAGCAAACCCGATCTT
GCCGCCGGAGGTACCGCAAA

Downstream 100 bases:

>100_bases
CTATGCCCAATCACCTCTTGATCTATGTCATCGTTGCGCTGAACGCAGGTTGCCAGGTGATGCTCATCTGGCGGCTGAAA
CTGGAGCGGGCCATGAAGTG

Product: TRAP proton/dicarboxylate symporter, large membrane protein component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSMENIATLPLMSKPKAAGWLIGIAAALLAVGFIYGNVGIVFALLLALMLTGVPVSIALGLTVLTFLYLLTNVPIEAVAL
KLFTGIEKFEIMAIPFFILAGNFLTHGGVARKMIDFATSMIGHLHGGLALAGILACAMFALVCGSSVATVVAIGSIILPA
MVRHGYPMRFGAGVIVCAGSLGILMLPSIPKVIYAISTNTSIGALFVAGLFPGILLTIMLCVVTWYVAKKRNYPRLPKAT
WAERLVAFRKSVWGLMLVVIIIGGIYSGVFTATEAAAMSAVYAFFISVFIYKDMGMKDVPRVLLKSANLSAMLLYIITNA
VLFSFLMSHENIPQAMADWILGKDLGVVAFLIFVNLVLLLAGNVMEPSSIILIFAPILFPAAMKLGIDPVHFGILIDANM
EVGLCHPPVGLNLYVASGISRLSISELTMAVMPWLMTMIVFLIIVTYWPSLSIWLPKVLGMM

Sequences:

>Translated_462_residues
MSMENIATLPLMSKPKAAGWLIGIAAALLAVGFIYGNVGIVFALLLALMLTGVPVSIALGLTVLTFLYLLTNVPIEAVAL
KLFTGIEKFEIMAIPFFILAGNFLTHGGVARKMIDFATSMIGHLHGGLALAGILACAMFALVCGSSVATVVAIGSIILPA
MVRHGYPMRFGAGVIVCAGSLGILMLPSIPKVIYAISTNTSIGALFVAGLFPGILLTIMLCVVTWYVAKKRNYPRLPKAT
WAERLVAFRKSVWGLMLVVIIIGGIYSGVFTATEAAAMSAVYAFFISVFIYKDMGMKDVPRVLLKSANLSAMLLYIITNA
VLFSFLMSHENIPQAMADWILGKDLGVVAFLIFVNLVLLLAGNVMEPSSIILIFAPILFPAAMKLGIDPVHFGILIDANM
EVGLCHPPVGLNLYVASGISRLSISELTMAVMPWLMTMIVFLIIVTYWPSLSIWLPKVLGMM
>Mature_461_residues
SMENIATLPLMSKPKAAGWLIGIAAALLAVGFIYGNVGIVFALLLALMLTGVPVSIALGLTVLTFLYLLTNVPIEAVALK
LFTGIEKFEIMAIPFFILAGNFLTHGGVARKMIDFATSMIGHLHGGLALAGILACAMFALVCGSSVATVVAIGSIILPAM
VRHGYPMRFGAGVIVCAGSLGILMLPSIPKVIYAISTNTSIGALFVAGLFPGILLTIMLCVVTWYVAKKRNYPRLPKATW
AERLVAFRKSVWGLMLVVIIIGGIYSGVFTATEAAAMSAVYAFFISVFIYKDMGMKDVPRVLLKSANLSAMLLYIITNAV
LFSFLMSHENIPQAMADWILGKDLGVVAFLIFVNLVLLLAGNVMEPSSIILIFAPILFPAAMKLGIDPVHFGILIDANME
VGLCHPPVGLNLYVASGISRLSISELTMAVMPWLMTMIVFLIIVTYWPSLSIWLPKVLGMM

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=382, Percent_Identity=33.5078534031414, Blast_Score=218, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 49510; Mature: 49379

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMENIATLPLMSKPKAAGWLIGIAAALLAVGFIYGNVGIVFALLLALMLTGVPVSIALG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LTVLTFLYLLTNVPIEAVALKLFTGIEKFEIMAIPFFILAGNFLTHGGVARKMIDFATSM
HHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH
IGHLHGGLALAGILACAMFALVCGSSVATVVAIGSIILPAMVRHGYPMRFGAGVIVCAGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
LGILMLPSIPKVIYAISTNTSIGALFVAGLFPGILLTIMLCVVTWYVAKKRNYPRLPKAT
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
WAERLVAFRKSVWGLMLVVIIIGGIYSGVFTATEAAAMSAVYAFFISVFIYKDMGMKDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RVLLKSANLSAMLLYIITNAVLFSFLMSHENIPQAMADWILGKDLGVVAFLIFVNLVLLL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGNVMEPSSIILIFAPILFPAAMKLGIDPVHFGILIDANMEVGLCHPPVGLNLYVASGIS
HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCCEEEHHCCCC
RLSISELTMAVMPWLMTMIVFLIIVTYWPSLSIWLPKVLGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SMENIATLPLMSKPKAAGWLIGIAAALLAVGFIYGNVGIVFALLLALMLTGVPVSIALG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LTVLTFLYLLTNVPIEAVALKLFTGIEKFEIMAIPFFILAGNFLTHGGVARKMIDFATSM
HHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH
IGHLHGGLALAGILACAMFALVCGSSVATVVAIGSIILPAMVRHGYPMRFGAGVIVCAGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
LGILMLPSIPKVIYAISTNTSIGALFVAGLFPGILLTIMLCVVTWYVAKKRNYPRLPKAT
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
WAERLVAFRKSVWGLMLVVIIIGGIYSGVFTATEAAAMSAVYAFFISVFIYKDMGMKDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RVLLKSANLSAMLLYIITNAVLFSFLMSHENIPQAMADWILGKDLGVVAFLIFVNLVLLL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGNVMEPSSIILIFAPILFPAAMKLGIDPVHFGILIDANMEVGLCHPPVGLNLYVASGIS
HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCCEEEHHCCCC
RLSISELTMAVMPWLMTMIVFLIIVTYWPSLSIWLPKVLGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]