| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118907
Identifier: 197118907
GI number: 197118907
Start: 2932677
End: 2932904
Strand: Reverse
Name: 197118907
Synonym: Gbem_2530
Alternate gene names: NA
Gene position: 2932904-2932677 (Counterclockwise)
Preceding gene: 308535305
Following gene: 197118899
Centisome position: 63.55
GC content: 53.95
Gene sequence:
>228_bases ATGAATCTCTTCCGGTCGGAAGAGCACGTGAGGAACTGGTCCCATTATGATTCCGCCTCGGCTGAGTCCGTCATGCCTTT ATCCGATTGGGCGTCGGTTTTCGGCGGGAACCTCTGCAGGAATCGTCTGCAGCCGGACTATGTGTCAAGAGTTAATGAGT ACGCATCCGAGTTGTTGCTGTCGTTGAAAAAGCTCGGCAAGGAGGGACGCTTCTGGACTCCGGAATAG
Upstream 100 bases:
>100_bases GATACTGGAGGTCAATCCGCCAATGGTAGCAGGGCACATGAATATCCCGTTCTCGAAGGCGTTGACGGGAGAAGTGACAT GGGGCTCGGCTTGAAGCCGC
Downstream 100 bases:
>100_bases CGGAGACCCGGCAAGTGACAGCAGGGGAGGGGGGGCGCCGCGACTTCTGCGCCCCCCCCGGTTCGCCTATGCCCGGGCCC CAGGACCGAGGCCGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MNLFRSEEHVRNWSHYDSASAESVMPLSDWASVFGGNLCRNRLQPDYVSRVNEYASELLLSLKKLGKEGRFWTPE
Sequences:
>Translated_75_residues MNLFRSEEHVRNWSHYDSASAESVMPLSDWASVFGGNLCRNRLQPDYVSRVNEYASELLLSLKKLGKEGRFWTPE >Mature_75_residues MNLFRSEEHVRNWSHYDSASAESVMPLSDWASVFGGNLCRNRLQPDYVSRVNEYASELLLSLKKLGKEGRFWTPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8707; Mature: 8707
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFRSEEHVRNWSHYDSASAESVMPLSDWASVFGGNLCRNRLQPDYVSRVNEYASELLL CCCCCCHHHHHCCHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH SLKKLGKEGRFWTPE HHHHHCCCCCCCCCC >Mature Secondary Structure MNLFRSEEHVRNWSHYDSASAESVMPLSDWASVFGGNLCRNRLQPDYVSRVNEYASELLL CCCCCCHHHHHCCHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH SLKKLGKEGRFWTPE HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA