Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 308535305

Identifier: 308535305

GI number: 308535305

Start: 2932911

End: 2933384

Strand: Reverse

Name: 308535305

Synonym: NA

Alternate gene names: NA

Gene position: 2933384-2932911 (Counterclockwise)

Preceding gene: 197118911

Following gene: 197118907

Centisome position: 63.56

GC content: 57.81

Gene sequence:

>474_bases
ATGCAAGACACATTAGTGCAGCGAGCTTACACTGCTGTCGTGGAGCATTTCAAGAAGACGGGGCGGGCACCGCACTACAC
CGAACTCGCGGGAACTCTCAGGGTGTCGCCCGAAGAAGCGAGGCAGGCACAGCACAAGGCGGCCGAGTCCGTCATAGGCT
GCTGGTTCGTCAAAGACACGGATCTGGTCGAGTCCTGGGCGCCTTTTTCCAATGTACCGACCCAATACCGTGTGACGGTC
GAGGGACAGCAGAAGTGGTACGGCCAGTGAGGCCTCGAAGTGCTGGCCGTGCGCTGGCTATTTCCCAATACCGAGATCCG
TATCGACACCAATTGCCTTGACTGCGGGGAACCGATCACCATCAGGATGCGTGACAACGAGATACTGGAGGTCAATCCGC
CAATGGTAGCAGGGCACATGAATATCCCGTTCTCGAAGGCGTTGACGGGAGAAGTGACATGGGGCTCGGCTTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:
NA

Sequences:

>Translated_157_residues
MQDTLVQRAYTAVVEHFKKTGRAPHYTELAGTLRVSPEEARQAQHKAAESVIGCWFVKDTDLVESWAPFSNVPTQYRVTV
EGQQKWYGQ*GLEVLAVRWLFPNTEIRIDTNCLDCGEPITIRMRDNEILEVNPPMVAGHMNIPFSKALTGEVTWGSA
>Mature_157_residues
MQDTLVQRAYTAVVEHFKKTGRAPHYTELAGTLRVSPEEARQAQHKAAESVIGCWFVKDTDLVESWAPFSNVPTQYRVTV
EGQQKWYGQ*GLEVLAVRWLFPNTEIRIDTNCLDCGEPITIRMRDNEILEVNPPMVAGHMNIPFSKALTGEVTWGSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17572; Mature: 17572

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDTLVQRAYTAVVEHFKKTGRAPHYTELAGTLRVSPEEARQAQHKAAESVIGCWFVKDT
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEECHHHHHHHHHHHHHHHEEEEEECCC
DLVESWAPFSNVPTQYRVTVEGQQKWYGQGLEVLAVRWLFPNTEIRIDTNCLDCGEPITI
HHHHHCCCCCCCCCEEEEEECCCCHHHCCCEEEEEEEEECCCCEEEEECCEECCCCCEEE
RMRDNEILEVNPPMVAGHMNIPFSKALTGEVTWGSA
EECCCEEEEECCCEEEEECCCCCCCCEECEEECCCC
>Mature Secondary Structure
MQDTLVQRAYTAVVEHFKKTGRAPHYTELAGTLRVSPEEARQAQHKAAESVIGCWFVKDT
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEECHHHHHHHHHHHHHHHEEEEEECCC
DLVESWAPFSNVPTQYRVTVEGQQKWYGQGLEVLAVRWLFPNTEIRIDTNCLDCGEPITI
HHHHHCCCCCCCCCEEEEEECCCCHHHCCCEEEEEEEEECCCCEEEEECCEECCCCCEEE
RMRDNEILEVNPPMVAGHMNIPFSKALTGEVTWGSA
EECCCEEEEECCCEEEEECCCCCCCCEECEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA