| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118880
Identifier: 197118880
GI number: 197118880
Start: 2902437
End: 2903105
Strand: Direct
Name: 197118880
Synonym: Gbem_2503
Alternate gene names: NA
Gene position: 2902437-2903105 (Clockwise)
Preceding gene: 197118870
Following gene: 197118887
Centisome position: 62.89
GC content: 60.84
Gene sequence:
>669_bases ATGTCGGATACGCCGAAATCGAGCAGCGAAAAACATATCGAAACCATCATGGAGCATCTGCAGCCGGGAACGGAGCGCTA CGAGGTGCTGGACCGGGCCAAGCGTTTCAAATCGTCCTGGGTCGAATTGGGCGAAAAGCTTTTGGACGTGAGCAAGAGGG CACGCTTTAGGGAGTGGGGCTACGGTAGTTTCGAGGAGTACTGCGTGCAGGAGATCCGCATCAAGCGGGGGACCGCCGAG AAGCTCACCATGGCCTACCGCTTCATGGAAAAGGAGGAGCCCCAGTTGATAGACCGGCGCGAGGAGCTGAAGCCGCTTCC CGACTACCGCTCCATCGACCTCTTGCGCCAGGCCAAGGAAGAGAAGGGTTTTACCGAAGAGGAGTACGGCGACCTGAGAA AGCGCGTGGTAGAAGAGGACCGCAGCCACCCGACCGTGCTGAAGAAGTTCAAGGAAGTGGCGGCCTTAAGGGAAGAGGTG AACCCGCTGGCGCCGCTCAAGGCAGGCATCTCGGCGGCCAGGAGGCTCGACTCCGCCCTGCGCGCCATGGAACGCGCCCC CGCCGTCTACCTGGAGCAGGTGAGCGAGATGATCGCGCACCTGGAACAGGAGCTCGAAGCATCGAGCGTAGGAAGCGAAG ACGAGGCCGGCAGCATCCGCGCCATATAA
Upstream 100 bases:
>100_bases TTGCAGCCAAGATAAAAAACTTCAAAAAGCGGACGGATTCTGATAATTTCCAGCTGCCCTTTTGAGCCGGCCAAGGCTCC TCGGGCTACGGAGGGAAAAG
Downstream 100 bases:
>100_bases TCACAAACAAAGGCTTTCACCACAGAGGACACAGAGGGACACAGAGGAAAACAAAAACCTTAAAAACGTGGAACAGGGAT GAAGGGGATAAAGGGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAE KLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEV NPLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI
Sequences:
>Translated_222_residues MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAE KLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEV NPLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI >Mature_221_residues SDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAEK LTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVN PLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25703; Mature: 25572
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS51143 MT_A70
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWG CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGSFEEYCVQEIRIKRGTAEKLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKE CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH EKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVNPLAPLKAGISAARRLDSAL HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWG CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGSFEEYCVQEIRIKRGTAEKLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKE CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH EKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVNPLAPLKAGISAARRLDSAL HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA