| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yqhE [C]
Identifier: 197118878
GI number: 197118878
Start: 2900995
End: 2901945
Strand: Reverse
Name: yqhE [C]
Synonym: Gbem_2501
Alternate gene names: 197118878
Gene position: 2901945-2900995 (Counterclockwise)
Preceding gene: 197118879
Following gene: 197118877
Centisome position: 62.88
GC content: 64.67
Gene sequence:
>951_bases ATGAACAAAGTTCGCCTTGGCAGCACCGGTTTGGAGATCAACCCCCTCGTTTTCGGCACTCTCCCCTTGGGTCCTTTGCA GGCAGGCCTCTCCCCCGACGAGGGGGGGAGGCTGATCCGCTACGCGCTGGAGCGCGGCGTCAACCTCTTGGACACCGCCG AACTGTACCAGACCTACCCGCACATCCTCTCCGCTTTATCCGGGTTTACCGGCGAGGTTTACATCGCCTCCAAGACCCAC GCCAATACGGCTGAGCAGGCACGCGCCCACGTCGAGCGCGCGCTGAAGGAACTGGAGTTGGAGCGGTTGGACATCGTGCA CCTGCACGGCGCCAGGGTCGCCGACCCGTTCGTAGAGCGCCCCGAGGTGATCGAGACGCTGCTCAGGATGAAGGAGGAGG GGAAGATCGCCCACGTAGGCCTTTCCTCCCATTTCGTCGGCGCCATCAGGAAGTCGGTGCAGCATCCCGAGATCGAGGTG GTGCATCCCCTCATCAACCGGGCCGGCATGGGGATCATCGACGGCACGCAGAATGAGATGGCCGAAGCCATAGCCGCCTG CGCCGATGCCGGCAAGGGAGTCTATGCCATGAAGGCGTTGGCCGGCGGCAACCTCATCTCCTCGGCGCGGGAGAGCCTGC GCTACGTGCTCGGGGTGCGCGGGGTCCACGGCGTGGCCCTGGGGATGCTTTCCGAACCGGAGATCGACGGGAACCTGGCC CTGTTCCACGATGACCGCGCCGATGAAGCGCTCTGGGAAAAGCTGGAGGGGAGAAGGCGCAAGCTCGCCATCATGGAGGC GTTTTGCAAGGGGTGCGGCGCCTGCGTCCCGGCCTGCACCAACGACGCGCTGAGGCTCGTGGACGGAAAAGCCGTCGTAG ACGAGGCCGAATGCATTCTCTGCGGCTACTGCGGCGCTGCCTGCCCGGAGTTCATGATCCGGGTGGTGTAA
Upstream 100 bases:
>100_bases CCCCCGCCGCATTACTAAACTAGATTGGGGCTAACCGAACCGGAAGACAGGACGGTTTCGCCTGCAAGCTAGCGCATCAC GTGAAGGGACTACAGATTCT
Downstream 100 bases:
>100_bases AAAAAAGGCGGAAACCTAAAGGCGGAACACAGAGGTCGCGGAGGTTCACGGAGGTCACAGAGGTTTTTTTTGTGAAACCC CAAAAAAGGCACTCACCACA
Product: aldo/keto reductase family oxidoreductase
Products: 2-keto-L-gulonate; NADP [C]
Alternate protein names: Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family Protein; Oxidoreductase Of Aldo/Keto Reductase Family
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV
Sequences:
>Translated_316_residues MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV >Mature_316_residues MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV
Specific function: Reduction [C]
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34040; Mature: 34040
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYP CCCEECCCCCCEECCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH HILSALSGFTGEVYIASKTHANTAEQARAHVERALKELELERLDIVHLHGARVADPFVER HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHCC PEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEVVHPLINRAGMGIIDGTQNEM HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCHHHH AEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECIL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHCCCCEEE CGYCGAACPEFMIRVV EECHHHHHHHHHHHCC >Mature Secondary Structure MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYP CCCEECCCCCCEECCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH HILSALSGFTGEVYIASKTHANTAEQARAHVERALKELELERLDIVHLHGARVADPFVER HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHCC PEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEVVHPLINRAGMGIIDGTQNEM HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCHHHH AEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECIL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHCCCCEEE CGYCGAACPEFMIRVV EECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-diketo-D-gluconate; NADPH [C]
Specific reaction: 2,5-diketo-D-gluconate + NADPH = 2-keto-L-gulonate + NADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA