| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118858
Identifier: 197118858
GI number: 197118858
Start: 2874595
End: 2875026
Strand: Direct
Name: 197118858
Synonym: Gbem_2481
Alternate gene names: NA
Gene position: 2874595-2875026 (Clockwise)
Preceding gene: 197118857
Following gene: 197118859
Centisome position: 62.29
GC content: 63.66
Gene sequence:
>432_bases GTGAAGATCCGGACGGGCAACGCCTACGACGCCGAGACCCACGGCACCGGCTGGTTTCTCGGCTTCAGCGACTGGACGCT GAACGACCCGTCGGGCCTGCTGCACGTCCCCAAAGGGGAAGCGCTCACCGGGCTCTGCGCCAAGTGGTACGATCACCCTT CCGGCGACGAAAGCGGCAACTCTAAGCCCGTCAGCGAGGGGAGGACTGTTTCCATTTTGGTCAGCGCCGACTCCGCTTTC CGGATCGAATTCTCGCCATCCCCCGACTTCCCCTCGGAAGAGGTGCAGAGCGTGCTACTCAAGCGGCACGGCGACTTCGC CGCCTGGGGGGAGGGTCTGTATCACCGGTGGCACTGCCTATCCCGAGCGACCGTCCTCACCATCAGATGGACCCCGACAA CTGCTGCGGCAAAGGACGAGACATCTTCATGA
Upstream 100 bases:
>100_bases CCCCTTGGCTCAGCTTCCCCGTGCCGCCTGCCGGGACAGCGCTCCAAGCGCAGTTTTCGCCTGGCGCTGAACCTCGCTCT GATTCCGCGGCGGGTGAGCC
Downstream 100 bases:
>100_bases CTAAAACCACCTCACCTCTCACGGCCAAAGTCCACTACGGCTGGATCATCGTCGCCACCAGCGCCCTGGGCCTTTTTTCC TGCTTCGGCCTGGCCCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS
Sequences:
>Translated_143_residues MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS >Mature_143_residues MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15681; Mature: 15681
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGN CEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC SKPVSEGRTVSILVSADSAFRIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCL CCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC SRATVLTIRWTPTTAAAKDETSS CCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGN CEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC SKPVSEGRTVSILVSADSAFRIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCL CCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC SRATVLTIRWTPTTAAAKDETSS CCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA