Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 197118802

GI number: 197118802

Start: 2811001

End: 2811585

Strand: Reverse

Name: lemA [H]

Synonym: Gbem_2423

Alternate gene names: 197118802

Gene position: 2811585-2811001 (Counterclockwise)

Preceding gene: 197118803

Following gene: 197118801

Centisome position: 60.92

GC content: 61.03

Gene sequence:

>585_bases
ATGAAAAGACCGATCCTAATGATACTGGCCCTGCTGACGCTCCTGGGGCTTTCCGGTTGCGGCTACAACACGATGCAGGC
CAAGGAGGAGGCGGTTTTCGCAGCCTGGGGGGATGTGGAGGCCTCATACCAAAGGCGCGCCGACCTGGTGCCTAACCTGG
TCGAGGTGGTGAAGGGATATGCGAAGCACGAAGCCGAGACCCTTACCGCTGTCACGGAGGCCCGGGCCAAGGTGGGGTCG
GTTCAGGTGACCCGCGACGCCGTCAACAGCCAGCAGGCGATGCAAAATTTCCAGCAGGCGCAGTCGCAGCTTTCCGGCGC
CCTGTCCCGGCTGATGGTGGTCGTGGAGCGCTACCCCGACCTCAAGGCCAACCAGAATTTCATGGACCTGCAGAACCAGC
TGGAGGGGACCGAAAACCGCATTAACGTGGCGCGGGTGCGCTACAACCAGTCGGTGCAGGATTTCAACACCACCATACGC
AGCTTCCCCAATTCGCTCACCAACTCAGTCCTGTTGCACCTCGCACGCAAAGAGCCGTTCAAGGCCGAAGAGGGGGCCAA
GACGGCCCCGAAGATCAAGTTCTAG

Upstream 100 bases:

>100_bases
GAACCCTCGCCGCGATCCTTAATAATTTTCTAGGAGAGGGTGGCTTTTCCTCCAGGTCATGATTATTATTGTGCTCATGA
TAATCAAGGAGGATGAAAAC

Downstream 100 bases:

>100_bases
ACTCTCATCGATCGAGGCGGCATGAAAAAGTTCCTTTTCCTCATCTGCGTTCTTTTGTTCGCGACCCTTTGCCAGGGGGT
GGAGGTTCCGCCGCTCAAGG

Product: LemA family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKRPILMILALLTLLGLSGCGYNTMQAKEEAVFAAWGDVEASYQRRADLVPNLVEVVKGYAKHEAETLTAVTEARAKVGS
VQVTRDAVNSQQAMQNFQQAQSQLSGALSRLMVVVERYPDLKANQNFMDLQNQLEGTENRINVARVRYNQSVQDFNTTIR
SFPNSLTNSVLLHLARKEPFKAEEGAKTAPKIKF

Sequences:

>Translated_194_residues
MKRPILMILALLTLLGLSGCGYNTMQAKEEAVFAAWGDVEASYQRRADLVPNLVEVVKGYAKHEAETLTAVTEARAKVGS
VQVTRDAVNSQQAMQNFQQAQSQLSGALSRLMVVVERYPDLKANQNFMDLQNQLEGTENRINVARVRYNQSVQDFNTTIR
SFPNSLTNSVLLHLARKEPFKAEEGAKTAPKIKF
>Mature_194_residues
MKRPILMILALLTLLGLSGCGYNTMQAKEEAVFAAWGDVEASYQRRADLVPNLVEVVKGYAKHEAETLTAVTEARAKVGS
VQVTRDAVNSQQAMQNFQQAQSQLSGALSRLMVVVERYPDLKANQNFMDLQNQLEGTENRINVARVRYNQSVQDFNTTIR
SFPNSLTNSVLLHLARKEPFKAEEGAKTAPKIKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21617; Mature: 21617

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPILMILALLTLLGLSGCGYNTMQAKEEAVFAAWGDVEASYQRRADLVPNLVEVVKGY
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AKHEAETLTAVTEARAKVGSVQVTRDAVNSQQAMQNFQQAQSQLSGALSRLMVVVERYPD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LKANQNFMDLQNQLEGTENRINVARVRYNQSVQDFNTTIRSFPNSLTNSVLLHLARKEPF
CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KAEEGAKTAPKIKF
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKRPILMILALLTLLGLSGCGYNTMQAKEEAVFAAWGDVEASYQRRADLVPNLVEVVKGY
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AKHEAETLTAVTEARAKVGSVQVTRDAVNSQQAMQNFQQAQSQLSGALSRLMVVVERYPD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LKANQNFMDLQNQLEGTENRINVARVRYNQSVQDFNTTIRSFPNSLTNSVLLHLARKEPF
CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KAEEGAKTAPKIKF
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]