| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ygcG [H]
Identifier: 197118801
GI number: 197118801
Start: 2810116
End: 2810979
Strand: Reverse
Name: ygcG [H]
Synonym: Gbem_2422
Alternate gene names: 197118801
Gene position: 2810979-2810116 (Counterclockwise)
Preceding gene: 197118802
Following gene: 197118800
Centisome position: 60.91
GC content: 63.77
Gene sequence:
>864_bases ATGAAAAAGTTCCTTTTCCTCATCTGCGTTCTTTTGTTCGCGACCCTTTGCCAGGGGGTGGAGGTTCCGCCGCTCAAGGG TTACGTGAACGATTACGCCGCCATGCTTTCGCCGGCGGCGGCGCAGCAGCTGGAAAGCGAGCTGGCCGCCTTCGAAAGAA GCGACTCCACCCAGATAGTGGTGCTCACCATCCCGAGCCTGGAAGGAGAGGTGCTGGAAGAGTACTCCATCAAGGTGGTG GAGAACTGGCGCATCGGTCAAAAGGGGAAGGACAACGGCGCCCTGCTCCTGGTGGCGAAAAATGACCGCAAGGTGCGGAT CGAGTCGGGGCGCGGGCTGGAAGGGACGCTGACCGACCTCATTTCCGGCCGCATTATCCGCAACGAAATCACCCCTGCCT TCAAGAGGGGCGAGTATGACCTGGGCGTCACCCGCGGCGCGGAGGCCATCATGGCGACCGTGCGCGGCGAGTACCAAGCG GAACCAAACGACCTGCGGCACGGGAAGAGGGGGGCCAACCCCATTTTCACGCTGCTCATCTTCGTGCTGGTCGCCTCGGT GTTCCTGGGGGGGATCTCCAGGATCCTTGGCGGGATGGCGGGCGCAGTCGGCGTCCCGGTGGCGGCTTTGCTCTCCTTCG GGGTGACCTCCCTGCTCCTTCTGGGCGGACTTGCCGTTGTAGGCTTTCTCTTGGGGCTATTCGTCTCCTTTTTGTTCGGC TCAGGGGGTAGGGGAGGGTTCTCGGGTGGCGGGCCTTTCTTCGGCGGTTTCGGAGGCGGAGGGTTCGGCGGCGGTTTCGG CGGGGGGGGATTCTCAGGAGGCGGCGGCAGCTTCGGCGGCGGCGGCGCTTCGGGAGACTGGTAA
Upstream 100 bases:
>100_bases AGTCCTGTTGCACCTCGCACGCAAAGAGCCGTTCAAGGCCGAAGAGGGGGCCAAGACGGCCCCGAAGATCAAGTTCTAGA CTCTCATCGATCGAGGCGGC
Downstream 100 bases:
>100_bases TGGACCTATCGCAGGCGCAACATGCAGAGGAGTTCTTCTCCCCCGAGGAGAAGGAGCGGATCCGCGAGGCGGTAGCGCAG GCGGAGAAACGCACCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKKFLFLICVLLFATLCQGVEVPPLKGYVNDYAAMLSPAAAQQLESELAAFERSDSTQIVVLTIPSLEGEVLEEYSIKVV ENWRIGQKGKDNGALLLVAKNDRKVRIESGRGLEGTLTDLISGRIIRNEITPAFKRGEYDLGVTRGAEAIMATVRGEYQA EPNDLRHGKRGANPIFTLLIFVLVASVFLGGISRILGGMAGAVGVPVAALLSFGVTSLLLLGGLAVVGFLLGLFVSFLFG SGGRGGFSGGGPFFGGFGGGGFGGGFGGGGFSGGGGSFGGGGASGDW
Sequences:
>Translated_287_residues MKKFLFLICVLLFATLCQGVEVPPLKGYVNDYAAMLSPAAAQQLESELAAFERSDSTQIVVLTIPSLEGEVLEEYSIKVV ENWRIGQKGKDNGALLLVAKNDRKVRIESGRGLEGTLTDLISGRIIRNEITPAFKRGEYDLGVTRGAEAIMATVRGEYQA EPNDLRHGKRGANPIFTLLIFVLVASVFLGGISRILGGMAGAVGVPVAALLSFGVTSLLLLGGLAVVGFLLGLFVSFLFG SGGRGGFSGGGPFFGGFGGGGFGGGFGGGGFSGGGGSFGGGGASGDW >Mature_287_residues MKKFLFLICVLLFATLCQGVEVPPLKGYVNDYAAMLSPAAAQQLESELAAFERSDSTQIVVLTIPSLEGEVLEEYSIKVV ENWRIGQKGKDNGALLLVAKNDRKVRIESGRGLEGTLTDLISGRIIRNEITPAFKRGEYDLGVTRGAEAIMATVRGEYQA EPNDLRHGKRGANPIFTLLIFVLVASVFLGGISRILGGMAGAVGVPVAALLSFGVTSLLLLGGLAVVGFLLGLFVSFLFG SGGRGGFSGGGPFFGGFGGGGFGGGFGGGGFSGGGGSFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=185, Percent_Identity=30.2702702702703, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29579; Mature: 29579
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLFLICVLLFATLCQGVEVPPLKGYVNDYAAMLSPAAAQQLESELAAFERSDSTQIV CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEE VLTIPSLEGEVLEEYSIKVVENWRIGQKGKDNGALLLVAKNDRKVRIESGRGLEGTLTDL EEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHH ISGRIIRNEITPAFKRGEYDLGVTRGAEAIMATVRGEYQAEPNDLRHGKRGANPIFTLLI HCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHH FVLVASVFLGGISRILGGMAGAVGVPVAALLSFGVTSLLLLGGLAVVGFLLGLFVSFLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGGRGGFSGGGPFFGGFGGGGFGGGFGGGGFSGGGGSFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKFLFLICVLLFATLCQGVEVPPLKGYVNDYAAMLSPAAAQQLESELAAFERSDSTQIV CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEE VLTIPSLEGEVLEEYSIKVVENWRIGQKGKDNGALLLVAKNDRKVRIESGRGLEGTLTDL EEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHH ISGRIIRNEITPAFKRGEYDLGVTRGAEAIMATVRGEYQAEPNDLRHGKRGANPIFTLLI HCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHH FVLVASVFLGGISRILGGMAGAVGVPVAALLSFGVTSLLLLGGLAVVGFLLGLFVSFLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGGRGGFSGGGPFFGGFGGGGFGGGFGGGGFSGGGGSFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]