| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is htpG [H]
Identifier: 197118793
GI number: 197118793
Start: 2798659
End: 2800593
Strand: Direct
Name: htpG [H]
Synonym: Gbem_2414
Alternate gene names: 197118793
Gene position: 2798659-2800593 (Clockwise)
Preceding gene: 197118786
Following gene: 197118795
Centisome position: 60.64
GC content: 57.88
Gene sequence:
>1935_bases ATGACCAAGACCGTCAAAAAGTTCGAGACCGAGGTTCAGCAACTCCTGGACCTGGTGATCCACTCCCTCTATTCCAACAA GGAAATCTTCCTCCGGGAGCTGATCTCTAACGCTTCTGACGCCATTGACAAGATAAAGTTCGAATCCCATTCCAACATGG AACTCCTGGAGGGGAACTCCGACTGGAAGATCAAGCTCCACGCGGACAAGGAAGCGGGAACCCTCACCGTCACCGACAAC GGCATCGGCATGAGCATGGACGAGGTGGCTGAAAATATCGGCACCATCGCTAAATCCGGCACCAAGAGCTTCGTGGCGGC ACTGAAGGAGCAGAACCTCGCCGACAACCCGGAGCTGATCGGGCAGTTTGGCGTCGGCTTCTACGCCTCTTTCATGGTGG CCGACAAGGTCGTCCTTACCACCAGGAAAGCGGGCGGCAAGGAGTTCGGCTGCCGCTGGGAGTCGACCGGCGACGGCAGC TACACCATCGAGGAGTGCGAAAAGGAGACCCGCGGCACCGAGATCGTCCTGCACCTCAAAGACGAAATGAAGGAGTTCCT CGACGAGTGGAAGATCCGCTCCATCGTGAAGAAGTACTCCGACTACGTGCAGTACCCGGTAGTCATGGACATCACCCGCA CCGAGCCGGTGAAGGACGCCGAAGGTAAGGTGATCGAGGGTGGCGGGACCATCGAGAAGACCACGGAGGAGACCCTCAAC TCCATGAAGGCGATCTGGACCAGGTCCAAGAGCGAGATCACCGAGGAGGAGTACGACGAGTTCTACAAGCACATCTCCCA CGACTACGACAAGCCGCTTTCCACCATCCATTACTCCGCCGAAGGGGTGAGCGAGTTCAAGGCAATCGTCTACATCCCTT CGCACAAACCCTACGACCTCTTCCTGCGGGACCACAAGAAAGGGGTGCACCTCTACGTGAAGCGGGTCTATATCACCGAC AACTGCGAGGCGCTGCTCCCCGACTACCTGCGCTTCATCAAGGGTGTGGTCGATTCCTCGGACCTGCCGCTCAACGTCTC CCGCGAGATCCTGCAGGAGGACGTGCAGATCAAGCGGATCCAGAAGTCCCTGGTCGGCAAGATCCTCTCCACCCTGGCCG AAATGAAGGAGAAGAACTTCGAGGAGTACCTGAAGTTCTATGCGGAATTCGGCCCGGTGCTCAAGGAAGGGATCCACTTC GACCACGCCAACAAGGAGAAGATCCAGGACCTCCTCCTCTACGAGAGCTCCAAGACCGAGAAAGGGAAGTACGTCTCCTT CAAGGAGTACGCGGAGCGCATGCCCGAGGGGCAGAAGGAGATCTACTTCATCACCGGCATGTCCCGCGAGGCGGTGGAGA ATTCACCCTATATGGAGGCGCTGCGTAAGAAGGATTACGAAGTCCTCTACATGATCGACCCGGTCGACGAGTGGGTGGTG CAGGCAATCACCGAGTACCAGGAGAAGCACCTGAAAGCGATCGACCGCGGCGACCTGGAGATAGACACCGAGGAGGAGAA GAAGGAGAAGGAAGCGAAGAAGGAGGAGGCGAAGAAGGAATACGGGAGCCTCATGGAGTTTATCCAGGAGACCCTCAAGG AGAAGGTGAAGGAAGTCCGCCTCTCCTCCCGCTTGACCGACAGCGCCTGCTGCCTGGTGGCCGACGAGATGGGGCTGAAC GCCAACATGGAGAAGATCCTCAAGGCGATGAACCAGGAGGTCCCGGAAGCGAAGAGGATCCTGGAACTAAACCCGGACCA CCAGATCCTGCAGGTCATGACGGCGATGTACGAAAAGGACAAGGCCGACCCGAAGCTCAAGGACTACAGCGAGCTCCTTT TCGATCAGGCCCTCCTCACCGAGGGGTCCCCGATCAAGGACCCGCTCCGCTTCACCAAGCTGGTGAGCGAGTTGATGGTC GTCGGCGGGAAATAA
Upstream 100 bases:
>100_bases TATGTATTTCGGTTTTTCTTTCCTCCCCCCTTGAAATACGGAACTGCAGTGATTAGGTTCTGCGGGTCCAATTACTTTCC CAAAGGAGATCACTACCACC
Downstream 100 bases:
>100_bases GGGAAGATAAAAATAAGCCGGGGGGACACAAGGTCCCTCCGGCTTTGCCATATTCAGGGGCCTAGCCCCTTGGCTATAGA GACGGACAGCCAGGCTTACA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MTKTVKKFETEVQQLLDLVIHSLYSNKEIFLRELISNASDAIDKIKFESHSNMELLEGNSDWKIKLHADKEAGTLTVTDN GIGMSMDEVAENIGTIAKSGTKSFVAALKEQNLADNPELIGQFGVGFYASFMVADKVVLTTRKAGGKEFGCRWESTGDGS YTIEECEKETRGTEIVLHLKDEMKEFLDEWKIRSIVKKYSDYVQYPVVMDITRTEPVKDAEGKVIEGGGTIEKTTEETLN SMKAIWTRSKSEITEEEYDEFYKHISHDYDKPLSTIHYSAEGVSEFKAIVYIPSHKPYDLFLRDHKKGVHLYVKRVYITD NCEALLPDYLRFIKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVGKILSTLAEMKEKNFEEYLKFYAEFGPVLKEGIHF DHANKEKIQDLLLYESSKTEKGKYVSFKEYAERMPEGQKEIYFITGMSREAVENSPYMEALRKKDYEVLYMIDPVDEWVV QAITEYQEKHLKAIDRGDLEIDTEEEKKEKEAKKEEAKKEYGSLMEFIQETLKEKVKEVRLSSRLTDSACCLVADEMGLN ANMEKILKAMNQEVPEAKRILELNPDHQILQVMTAMYEKDKADPKLKDYSELLFDQALLTEGSPIKDPLRFTKLVSELMV VGGK
Sequences:
>Translated_644_residues MTKTVKKFETEVQQLLDLVIHSLYSNKEIFLRELISNASDAIDKIKFESHSNMELLEGNSDWKIKLHADKEAGTLTVTDN GIGMSMDEVAENIGTIAKSGTKSFVAALKEQNLADNPELIGQFGVGFYASFMVADKVVLTTRKAGGKEFGCRWESTGDGS YTIEECEKETRGTEIVLHLKDEMKEFLDEWKIRSIVKKYSDYVQYPVVMDITRTEPVKDAEGKVIEGGGTIEKTTEETLN SMKAIWTRSKSEITEEEYDEFYKHISHDYDKPLSTIHYSAEGVSEFKAIVYIPSHKPYDLFLRDHKKGVHLYVKRVYITD NCEALLPDYLRFIKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVGKILSTLAEMKEKNFEEYLKFYAEFGPVLKEGIHF DHANKEKIQDLLLYESSKTEKGKYVSFKEYAERMPEGQKEIYFITGMSREAVENSPYMEALRKKDYEVLYMIDPVDEWVV QAITEYQEKHLKAIDRGDLEIDTEEEKKEKEAKKEEAKKEYGSLMEFIQETLKEKVKEVRLSSRLTDSACCLVADEMGLN ANMEKILKAMNQEVPEAKRILELNPDHQILQVMTAMYEKDKADPKLKDYSELLFDQALLTEGSPIKDPLRFTKLVSELMV VGGK >Mature_643_residues TKTVKKFETEVQQLLDLVIHSLYSNKEIFLRELISNASDAIDKIKFESHSNMELLEGNSDWKIKLHADKEAGTLTVTDNG IGMSMDEVAENIGTIAKSGTKSFVAALKEQNLADNPELIGQFGVGFYASFMVADKVVLTTRKAGGKEFGCRWESTGDGSY TIEECEKETRGTEIVLHLKDEMKEFLDEWKIRSIVKKYSDYVQYPVVMDITRTEPVKDAEGKVIEGGGTIEKTTEETLNS MKAIWTRSKSEITEEEYDEFYKHISHDYDKPLSTIHYSAEGVSEFKAIVYIPSHKPYDLFLRDHKKGVHLYVKRVYITDN CEALLPDYLRFIKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVGKILSTLAEMKEKNFEEYLKFYAEFGPVLKEGIHFD HANKEKIQDLLLYESSKTEKGKYVSFKEYAERMPEGQKEIYFITGMSREAVENSPYMEALRKKDYEVLYMIDPVDEWVVQ AITEYQEKHLKAIDRGDLEIDTEEEKKEKEAKKEEAKKEYGSLMEFIQETLKEKVKEVRLSSRLTDSACCLVADEMGLNA NMEKILKAMNQEVPEAKRILELNPDHQILQVMTAMYEKDKADPKLKDYSELLFDQALLTEGSPIKDPLRFTKLVSELMVV GGK
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI154146191, Length=687, Percent_Identity=40.3202328966521, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI153792590, Length=687, Percent_Identity=40.3202328966521, Blast_Score=474, Evalue=1e-133, Organism=Homo sapiens, GI20149594, Length=681, Percent_Identity=40.2349486049927, Blast_Score=471, Evalue=1e-132, Organism=Homo sapiens, GI4507677, Length=662, Percent_Identity=37.6132930513595, Blast_Score=428, Evalue=1e-120, Organism=Homo sapiens, GI155722983, Length=647, Percent_Identity=35.0850077279753, Blast_Score=394, Evalue=1e-109, Organism=Escherichia coli, GI1786679, Length=638, Percent_Identity=46.2382445141066, Blast_Score=573, Evalue=1e-165, Organism=Caenorhabditis elegans, GI17559162, Length=671, Percent_Identity=41.2816691505216, Blast_Score=483, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17542208, Length=667, Percent_Identity=37.0314842578711, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI115535205, Length=651, Percent_Identity=33.1797235023041, Blast_Score=342, Evalue=4e-94, Organism=Caenorhabditis elegans, GI115535167, Length=437, Percent_Identity=35.4691075514874, Blast_Score=270, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6323840, Length=675, Percent_Identity=38.962962962963, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6325016, Length=216, Percent_Identity=43.5185185185185, Blast_Score=182, Evalue=1e-46, Organism=Drosophila melanogaster, GI17647529, Length=681, Percent_Identity=40.3817914831131, Blast_Score=499, Evalue=1e-141, Organism=Drosophila melanogaster, GI21357739, Length=675, Percent_Identity=38.2222222222222, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI24586016, Length=637, Percent_Identity=36.5777080062794, Blast_Score=392, Evalue=1e-109,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 73927; Mature: 73796
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTVKKFETEVQQLLDLVIHSLYSNKEIFLRELISNASDAIDKIKFESHSNMELLEGNS CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC DWKIKLHADKEAGTLTVTDNGIGMSMDEVAENIGTIAKSGTKSFVAALKEQNLADNPELI CEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH GQFGVGFYASFMVADKVVLTTRKAGGKEFGCRWESTGDGSYTIEECEKETRGTEIVLHLK HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEH DEMKEFLDEWKIRSIVKKYSDYVQYPVVMDITRTEPVKDAEGKVIEGGGTIEKTTEETLN HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHH SMKAIWTRSKSEITEEEYDEFYKHISHDYDKPLSTIHYSAEGVSEFKAIVYIPSHKPYDL HHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCEEEEEECCCCCHHH FLRDHKKGVHLYVKRVYITDNCEALLPDYLRFIKGVVDSSDLPLNVSREILQEDVQIKRI HHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH QKSLVGKILSTLAEMKEKNFEEYLKFYAEFGPVLKEGIHFDHANKEKIQDLLLYESSKTE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC KGKYVSFKEYAERMPEGQKEIYFITGMSREAVENSPYMEALRKKDYEVLYMIDPVDEWVV CCCEECHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHCCCCEEEEEECCHHHHHH QAITEYQEKHLKAIDRGDLEIDTEEEKKEKEAKKEEAKKEYGSLMEFIQETLKEKVKEVR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSRLTDSACCLVADEMGLNANMEKILKAMNQEVPEAKRILELNPDHQILQVMTAMYEKD HHHCCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHC KADPKLKDYSELLFDQALLTEGSPIKDPLRFTKLVSELMVVGGK CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKTVKKFETEVQQLLDLVIHSLYSNKEIFLRELISNASDAIDKIKFESHSNMELLEGNS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC DWKIKLHADKEAGTLTVTDNGIGMSMDEVAENIGTIAKSGTKSFVAALKEQNLADNPELI CEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH GQFGVGFYASFMVADKVVLTTRKAGGKEFGCRWESTGDGSYTIEECEKETRGTEIVLHLK HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEH DEMKEFLDEWKIRSIVKKYSDYVQYPVVMDITRTEPVKDAEGKVIEGGGTIEKTTEETLN HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHH SMKAIWTRSKSEITEEEYDEFYKHISHDYDKPLSTIHYSAEGVSEFKAIVYIPSHKPYDL HHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCEEEEEECCCCCHHH FLRDHKKGVHLYVKRVYITDNCEALLPDYLRFIKGVVDSSDLPLNVSREILQEDVQIKRI HHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH QKSLVGKILSTLAEMKEKNFEEYLKFYAEFGPVLKEGIHFDHANKEKIQDLLLYESSKTE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC KGKYVSFKEYAERMPEGQKEIYFITGMSREAVENSPYMEALRKKDYEVLYMIDPVDEWVV CCCEECHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHCCCCEEEEEECCHHHHHH QAITEYQEKHLKAIDRGDLEIDTEEEKKEKEAKKEEAKKEYGSLMEFIQETLKEKVKEVR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSRLTDSACCLVADEMGLNANMEKILKAMNQEVPEAKRILELNPDHQILQVMTAMYEKD HHHCCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHC KADPKLKDYSELLFDQALLTEGSPIKDPLRFTKLVSELMVVGGK CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA