Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118673

Identifier: 197118673

GI number: 197118673

Start: 2662430

End: 2663470

Strand: Reverse

Name: 197118673

Synonym: Gbem_2292

Alternate gene names: NA

Gene position: 2663470-2662430 (Counterclockwise)

Preceding gene: 197118674

Following gene: 197118672

Centisome position: 57.71

GC content: 62.15

Gene sequence:

>1041_bases
ATGGAAACCAGTACGAAGCCGCCCGACCTTTTGGCCTATACCGACTCTCTGCTGACCTGGGTCAGCGGCCGGGGGCGCAT
CCTGATAGTGGTGCACGACAACCCCGACCCCGATTCGCTCGCCTCAGCCATGGCGTTGCGGCACTTTTTTGCGGTGAAGC
TGAACCGCGAGGCGGTGATCGCCTTCTCCGGCATGATCGGCAGAAGCGAAAACCTCGCCATGGCGAAACTGCTCCAGATT
CCGCTCACCCCGCTGCCCCTCATCGACCTCAAATGTTTCCAGGTTGTCTGCCTGCTGGACACGCAACCCGGCACCGGGAA
CAACTCCCTCCCCGCAGGGATGCGCACCGACATCGTCATCGACCACCATCCCATGCGTGAATCCAGTGCCGCCTGCCGGT
GGGTCGATATCCGCCCCGATTACGGGACCACGGCGACCATTCTTTTCGAGTACCTGAAGGTGCAGGGGGTGTCGATCGGG
ACCAAGATGGCCACAGCGCTCTTCTACGCCATCAAATCCGAGACGCAGGACCTGGGGCGTGAGGCGAGAAGGGCGGACCG
GGACGCCTACCTGGATCTTTTCCCGCTGGCCAACAAGACCCTTTTAAACAGCATCACCCGCCCAAGCCTTCCCCGCGAAT
ACTTCATCTCGCTGCATAACGCGCTGGAGCACGCGGCGCTCTACGGCAAGGTGCTGGTGGCGTCGCTCAAGGGGATTCAG
TTCCCCGAGGTGGTGGCCGAGCTAGCCGACCTCCTGGTGCGGCTGGAAGGGACCGATACGGTGCTTTGCCTCGGGCACTA
CAGCGCCGAACTCGTTCTCTCCATCAGGACCTCGAACGAGGAGATAAACGCCGGCGAATTGATCCGCAAGCTGGTCGCCG
GTATCGGCGCTGCAGGCGGCCACGGCATGATGGCCGGCGGCAAGATCGACTTGAGCGACAACTCGGAGCAGGCCATTCAT
GAGCTGGAGAACCTGCTCACCGAACGGCTGCTGGCCGAGCTGAAGATTTCCGATCTGAAACCGGTGCCGCTGGTCCCCTG
A

Upstream 100 bases:

>100_bases
GCCGCTTTTGCCACCGTCTCAACCAAGCCGTTTTCTTGCCTTAGCGCCGCCCCTGGTATAGACTTCACAAGTTTTTGAGC
TTAGAAAACGGGGGTGCCAT

Downstream 100 bases:

>100_bases
AAGGTTCATGAAAGCGGTTGCCAAACGACCCTCAAAATGCTAGTAGATACCCTATGCCCGTCTTCCTTGATAACGCCGCG
ACCTCATTCCCTAAACCGGA

Product: DHH domain phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI
PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG
TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ
FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH
ELENLLTERLLAELKISDLKPVPLVP

Sequences:

>Translated_346_residues
METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI
PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG
TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ
FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH
ELENLLTERLLAELKISDLKPVPLVP
>Mature_346_residues
METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI
PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG
TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ
FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH
ELENLLTERLLAELKISDLKPVPLVP

Specific function: Unknown

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR003148 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 37760; Mature: 37760

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVI
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEE
AFSGMIGRSENLAMAKLLQIPLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVI
EEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEE
DHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIGTKMATALFYAIKSETQDLGR
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
EARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ
HHHHCCCHHEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGG
CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
HGMMAGGKIDLSDNSEQAIHELENLLTERLLAELKISDLKPVPLVP
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVI
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEE
AFSGMIGRSENLAMAKLLQIPLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVI
EEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEE
DHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIGTKMATALFYAIKSETQDLGR
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
EARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ
HHHHCCCHHEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGG
CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
HGMMAGGKIDLSDNSEQAIHELENLLTERLLAELKISDLKPVPLVP
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]