| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197118651
GI number: 197118651
Start: 2640421
End: 2642406
Strand: Direct
Name: zraS [H]
Synonym: Gbem_2270
Alternate gene names: 197118651
Gene position: 2640421-2642406 (Clockwise)
Preceding gene: 197118650
Following gene: 197118654
Centisome position: 57.21
GC content: 64.8
Gene sequence:
>1986_bases ATGACTCTTCCCAAGCTGCGCTTTCCCATAAAGACCAAGCTCACCGTGGCGACGCTCATCCCGCTGGGGATAGCGATCCT CATCTGCTGGATGGCCGGGGTCTTCATTTTGAGCTCCAAGGTCGCCGCCCAGGCCCAGGAGAAGGTCCGCTACGACCTGA GTGTCGCCCGCGAGGCTTACCAGAGCGAGCTTTCGCGCATCTACGACGTGGTGAAGCTCACCGCCTCCTTCGGCAGGACC GCCGAGACCATCGCCTCCGGCGACCGGCGGGCGGTGAGCGAGTCGCTTTCTTCATTGCGCGCCAGCGAGCGCCTGGACAT CCTCGCCGCCGTAGACGCCTCGGGAAAGGTGATCTTCAGGGCCAACAACCCCGAGCTGCGCGGCGACGACAAGACCCGCA ACCAGTTCGTAGCGCGCGCTTTGAAGGGGGAGATCGCCAGCGGCACCACCATCCTCCCCTCTTCCGAGCTTGAGCTCGAA GGAGACAGCCTGGTGCGCCAGGCGCGCATCTTCCCCGCCGCAGGAACCCCGGTGCAGCTAAACGGCGCCATGTTCCTCCT GGTCGCGGCACCGGTGCGGGACAAGGCGGGGAACCTGCTGGGGGCGCTCTACGGCGGGGTGCTCCTCAACAACAACCAGA AGCTCGTGGACCGGATCCGCTCCGTGGTCTACGAGGGGGCGCGGAAAAACGGCCGGGACGTTGGTAACTCCACCATCTTC CAGGGGGACATAAGGATCGCCACCAACGTCCCCAACACCGACGGCAGCCGGGCCGTCGGCACCAGGCTCTCCGCGCCGGT CCAGGAGCGGGTGCTCCTCAAGGGGGCCAAGTGGGTCGGGCGCGCCTTCGTGGTGAACGACTGGTACCTGACCGCCTACG AACCGATCCTCTCGCTGCAGGGGGTCCCGATCGGCGCCCTCTACGTGGGGATGCTGGAGAGCCAGTATTCGGCGGTCAAG ATCGACATGGCCGTCCTTTTGAGCTTCGTCCTTTTGGTGAGCGGCCTGGTGGGGGTCTCCATGGCCGGGTTCCTGGGGAG GAAGCTCTCCCAGCCCATACGGGAGTTGGACCTTCTGGCGCGACGCGTAGCCGCAGGCGAGCGCAACGTGAAAAGCAGCA TCGACTCCCGGGACGAGATCGGCGACCTGGCGGTGCGGTTCAACGACATGAGCCGTTCGCTCGTGGAGCGCGAGGACTCG ATCATCGAACTGAACCGCAACCTGGAAGAGAAGGTGCAGTCGAGAACGGCGGAACTGGAGGAGAAGAACCGGCTCCTGGT GCAGACCCGCGAGGAGTTGTTGCGGGTGGAGAAGCTGGCGGCGATAGGCGAGCTGGCTGCGGGGGTCGCGCACGAGATCA ACAACCCGATGGCGATCATCCGCGGCAACACGGAGTTGTTGCAGCTCTCGGTGCCGGAGGAAGCCCCGATCCGTGAGGAA GTGGACACCATTTTCCAGCAGGTGAAAAGGGTGGAGCGGATCGTATCGAACCTGTTGAAATTCGCCAGGCGCGAGCAGAT GGAAGCTGGAGCCGTGCGGCTGAACGAGCTCTTGCACGAGATCGTGGGCCAGATCGGGCACCAGGTGTCGCTTGAGAGGA TAGAGATAGCGGAGCAGTATGCGGAGAGCGTGGCGCAGGTGGAGGGGGATGCGGACCAGTTGCGTCAGGTGTTCACCAAC CTGGTCTTGAACGCGGTGCAGGCGATGCCGTCAGGGGGCGTTCTCTCGGTGAGGACCCAGCAGGTGGAGCCCGCGGGGAG CTACGAGGTAAAAGTCGGCGACACCGGGGTCGGCATCGCGCTGGAGAACCTGAGACAGGTATTCAACCCCTTCTACACCA CCAAGGCCAACGGCACCGGCCTCGGACTTTCCGTATCCTACGGCATCGTCCGGGAGCATGGAGGGCGCATCGACGTCGAG AGCGTCCCGGGCGGCGGGAGCACCTTCACCGTGGTGCTCCCGCGCTCCCAAACGCCGGGGGCCTAG
Upstream 100 bases:
>100_bases CCGGAACCGGGTACCACAAGAGCAGGTCGGCCGAGATCCTGGGCATCTCCAGAAAAACCCTGGACCGCAAGATCGTCGAA TACCGCATCACCATTCCCTC
Downstream 100 bases:
>100_bases AGTATCGCCACCGCATCACCGGGGCGCACCACGCCCCCCTTCAGCACCTTGGCGAAGATCCCTTCCTTGGGCATGACGCA GTCGCCGGCCTGGTAGTAGA
Product: HAMP domain-containing sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MTLPKLRFPIKTKLTVATLIPLGIAILICWMAGVFILSSKVAAQAQEKVRYDLSVAREAYQSELSRIYDVVKLTASFGRT AETIASGDRRAVSESLSSLRASERLDILAAVDASGKVIFRANNPELRGDDKTRNQFVARALKGEIASGTTILPSSELELE GDSLVRQARIFPAAGTPVQLNGAMFLLVAAPVRDKAGNLLGALYGGVLLNNNQKLVDRIRSVVYEGARKNGRDVGNSTIF QGDIRIATNVPNTDGSRAVGTRLSAPVQERVLLKGAKWVGRAFVVNDWYLTAYEPILSLQGVPIGALYVGMLESQYSAVK IDMAVLLSFVLLVSGLVGVSMAGFLGRKLSQPIRELDLLARRVAAGERNVKSSIDSRDEIGDLAVRFNDMSRSLVEREDS IIELNRNLEEKVQSRTAELEEKNRLLVQTREELLRVEKLAAIGELAAGVAHEINNPMAIIRGNTELLQLSVPEEAPIREE VDTIFQQVKRVERIVSNLLKFARREQMEAGAVRLNELLHEIVGQIGHQVSLERIEIAEQYAESVAQVEGDADQLRQVFTN LVLNAVQAMPSGGVLSVRTQQVEPAGSYEVKVGDTGVGIALENLRQVFNPFYTTKANGTGLGLSVSYGIVREHGGRIDVE SVPGGGSTFTVVLPRSQTPGA
Sequences:
>Translated_661_residues MTLPKLRFPIKTKLTVATLIPLGIAILICWMAGVFILSSKVAAQAQEKVRYDLSVAREAYQSELSRIYDVVKLTASFGRT AETIASGDRRAVSESLSSLRASERLDILAAVDASGKVIFRANNPELRGDDKTRNQFVARALKGEIASGTTILPSSELELE GDSLVRQARIFPAAGTPVQLNGAMFLLVAAPVRDKAGNLLGALYGGVLLNNNQKLVDRIRSVVYEGARKNGRDVGNSTIF QGDIRIATNVPNTDGSRAVGTRLSAPVQERVLLKGAKWVGRAFVVNDWYLTAYEPILSLQGVPIGALYVGMLESQYSAVK IDMAVLLSFVLLVSGLVGVSMAGFLGRKLSQPIRELDLLARRVAAGERNVKSSIDSRDEIGDLAVRFNDMSRSLVEREDS IIELNRNLEEKVQSRTAELEEKNRLLVQTREELLRVEKLAAIGELAAGVAHEINNPMAIIRGNTELLQLSVPEEAPIREE VDTIFQQVKRVERIVSNLLKFARREQMEAGAVRLNELLHEIVGQIGHQVSLERIEIAEQYAESVAQVEGDADQLRQVFTN LVLNAVQAMPSGGVLSVRTQQVEPAGSYEVKVGDTGVGIALENLRQVFNPFYTTKANGTGLGLSVSYGIVREHGGRIDVE SVPGGGSTFTVVLPRSQTPGA >Mature_660_residues TLPKLRFPIKTKLTVATLIPLGIAILICWMAGVFILSSKVAAQAQEKVRYDLSVAREAYQSELSRIYDVVKLTASFGRTA ETIASGDRRAVSESLSSLRASERLDILAAVDASGKVIFRANNPELRGDDKTRNQFVARALKGEIASGTTILPSSELELEG DSLVRQARIFPAAGTPVQLNGAMFLLVAAPVRDKAGNLLGALYGGVLLNNNQKLVDRIRSVVYEGARKNGRDVGNSTIFQ GDIRIATNVPNTDGSRAVGTRLSAPVQERVLLKGAKWVGRAFVVNDWYLTAYEPILSLQGVPIGALYVGMLESQYSAVKI DMAVLLSFVLLVSGLVGVSMAGFLGRKLSQPIRELDLLARRVAAGERNVKSSIDSRDEIGDLAVRFNDMSRSLVEREDSI IELNRNLEEKVQSRTAELEEKNRLLVQTREELLRVEKLAAIGELAAGVAHEINNPMAIIRGNTELLQLSVPEEAPIREEV DTIFQQVKRVERIVSNLLKFARREQMEAGAVRLNELLHEIVGQIGHQVSLERIEIAEQYAESVAQVEGDADQLRQVFTNL VLNAVQAMPSGGVLSVRTQQVEPAGSYEVKVGDTGVGIALENLRQVFNPFYTTKANGTGLGLSVSYGIVREHGGRIDVES VPGGGSTFTVVLPRSQTPGA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=38.1974248927039, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1788549, Length=228, Percent_Identity=34.2105263157895, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1790300, Length=250, Percent_Identity=30.8, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1786600, Length=287, Percent_Identity=29.9651567944251, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788393, Length=318, Percent_Identity=26.1006289308176, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI87081816, Length=367, Percent_Identity=28.0653950953678, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789149, Length=355, Percent_Identity=26.7605633802817, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI145693157, Length=223, Percent_Identity=30.4932735426009, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=252, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1790861, Length=243, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786783, Length=261, Percent_Identity=25.6704980842912, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790346, Length=219, Percent_Identity=22.8310502283105, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI48994928, Length=115, Percent_Identity=38.2608695652174, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=24.5059288537549, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71856; Mature: 71724
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPKLRFPIKTKLTVATLIPLGIAILICWMAGVFILSSKVAAQAQEKVRYDLSVAREAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSELSRIYDVVKLTASFGRTAETIASGDRRAVSESLSSLRASERLDILAAVDASGKVIFR HHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE ANNPELRGDDKTRNQFVARALKGEIASGTTILPSSELELEGDSLVRQARIFPAAGTPVQL ECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEE NGAMFLLVAAPVRDKAGNLLGALYGGVLLNNNQKLVDRIRSVVYEGARKNGRDVGNSTIF CCEEEEEEECCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE QGDIRIATNVPNTDGSRAVGTRLSAPVQERVLLKGAKWVGRAFVVNDWYLTAYEPILSLQ ECCEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCHHHCCEEEEECEEHHHHHHHHHCC GVPIGALYVGMLESQYSAVKIDMAVLLSFVLLVSGLVGVSMAGFLGRKLSQPIRELDLLA CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVAAGERNVKSSIDSRDEIGDLAVRFNDMSRSLVEREDSIIELNRNLEEKVQSRTAELE HHHHCCCCHHHHHCCCHHHHHHHHEEEHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHH EKNRLLVQTREELLRVEKLAAIGELAAGVAHEINNPMAIIRGNTELLQLSVPEEAPIREE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHH VDTIFQQVKRVERIVSNLLKFARREQMEAGAVRLNELLHEIVGQIGHQVSLERIEIAEQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AESVAQVEGDADQLRQVFTNLVLNAVQAMPSGGVLSVRTQQVEPAGSYEVKVGDTGVGIA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCHHH LENLRQVFNPFYTTKANGTGLGLSVSYGIVREHGGRIDVESVPGGGSTFTVVLPRSQTPG HHHHHHHHCCCEECCCCCCCCEEEEEHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCC A C >Mature Secondary Structure TLPKLRFPIKTKLTVATLIPLGIAILICWMAGVFILSSKVAAQAQEKVRYDLSVAREAY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSELSRIYDVVKLTASFGRTAETIASGDRRAVSESLSSLRASERLDILAAVDASGKVIFR HHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE ANNPELRGDDKTRNQFVARALKGEIASGTTILPSSELELEGDSLVRQARIFPAAGTPVQL ECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCEEE NGAMFLLVAAPVRDKAGNLLGALYGGVLLNNNQKLVDRIRSVVYEGARKNGRDVGNSTIF CCEEEEEEECCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE QGDIRIATNVPNTDGSRAVGTRLSAPVQERVLLKGAKWVGRAFVVNDWYLTAYEPILSLQ ECCEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCHHHCCEEEEECEEHHHHHHHHHCC GVPIGALYVGMLESQYSAVKIDMAVLLSFVLLVSGLVGVSMAGFLGRKLSQPIRELDLLA CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVAAGERNVKSSIDSRDEIGDLAVRFNDMSRSLVEREDSIIELNRNLEEKVQSRTAELE HHHHCCCCHHHHHCCCHHHHHHHHEEEHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHH EKNRLLVQTREELLRVEKLAAIGELAAGVAHEINNPMAIIRGNTELLQLSVPEEAPIREE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHH VDTIFQQVKRVERIVSNLLKFARREQMEAGAVRLNELLHEIVGQIGHQVSLERIEIAEQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AESVAQVEGDADQLRQVFTNLVLNAVQAMPSGGVLSVRTQQVEPAGSYEVKVGDTGVGIA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCHHH LENLRQVFNPFYTTKANGTGLGLSVSYGIVREHGGRIDVESVPGGGSTFTVVLPRSQTPG HHHHHHHHCCCEECCCCCCCCEEEEEHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]