Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118557

Identifier: 197118557

GI number: 197118557

Start: 2535511

End: 2536707

Strand: Direct

Name: 197118557

Synonym: Gbem_2176

Alternate gene names: NA

Gene position: 2535511-2536707 (Clockwise)

Preceding gene: 197118536

Following gene: 197118558

Centisome position: 54.94

GC content: 56.06

Gene sequence:

>1197_bases
ATGAAGCGTCTACTGGGGAAGATCGACGAGGGGCTGCTCACTTCCGAGCAGCGTCCGATGCTGCGCTTCCTGATCATCCT
CACCGCGGCTTCGACGATCGGGCTGCAGGGTTACACCATTCTTTTCAACAACTTTGCAGCCGAGATGGTGCACCTGGACG
GTAGCCAGGTCGGCATGACGCAGTCGGTGCGGGAAATTCCGGGGCTACTGACGCTGCTGGTGGTCTTCGTGCTAATGTTC
ATGCGCGAGCACAAACTGGCCGCGCTCTCGGTGCTGCTCTTGGGGCTCGGTACCGGTATCACCGCGCTCATTCCGTCCTA
CGGCTGGGTGATCTTCACCACGGTAGTGATGAGCTTCGGTTTTCACTACTACGAGTCGACGAACCAGTCGCTCACGCTGC
AGTACTTTTCCACCGCCGTGTCCCCCATTGTCTTTGGACGCCTCCGAGCGCTGGCAGCGGTTTCCAGCGTGGTAGCGGGT
ATCATGGTCTACTGCCTGAGTTCAGTGGTGCAGTACCGGGGAATGTATCTGGCTATCGGCGCGGTGGTGGTCATCGCAGG
CCTTTGGGGACTTTGCCAGAACCCCACCCACTCAGGGATCGTGCCCCAGCGCAAGAAGATGATACTGCGGCGCAGGTATT
CGCTCTTTTACATCCTGACCCTTCTCTCCGGGGCCAGGCGGCAGATCTTCGTAGTCTTCTCGATACTGCTATTGGTGCAG
GTGTTCCATTTCACGGTGCGGGAGATGACCATCCTTTTCATCGTGAACAACATCGTCGCCTATATCCTCAACTCTTTGAT
AGGAAAGGCGATCAACCGTTTCGGCGAACGATTCATCTCCTCCTGCGAATACGCCGGTGTCATCGTCATCTTCCTGGTCT
ATGCCTTCAGCACCTCGAAATATCTGGTCATGTTCATGTACATACTGGACAACATCCTCTACAATTTCGAGGTTTCGATC
CGGACCTACTTTCAGAAGGTGGCAGACCCTGCCGACATATCCTCATCCATGTCTGTAGGTTTCACCATCAATCACATAGC
CGCCGTTTTCCTCCCCGCCCTGGGCGGTTACTTCTGGATGTTGGACTACCGCATCCCATTCATCGGAGGCACCGTACTGG
GTGTGATTTCCCTGATCGCGGCACAGTGGATGCGGGTACCTGAGAAGGCACCGAAGGCGGAGACGTCAGCTAGTTAA

Upstream 100 bases:

>100_bases
CTTTGCGCCGCATTGGGTTCCCAAGCTGGAGCTTGGGAACCAGGAGCCCCCGAATCGTGGGCAACGCCGGATTGTCACAC
AGCAAACGATGGAGAGTTAC

Downstream 100 bases:

>100_bases
AAAGGAAAATAACGAAAGGTATGGCGGTAAGTAGATACGCAGATATGACAGTAAGGAGGTGTGCTGATGTTTAAGCGAAT
AGACCACGTAGAGATCATTC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Of Facilitator Superfamily; Permease Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKRLLGKIDEGLLTSEQRPMLRFLIILTAASTIGLQGYTILFNNFAAEMVHLDGSQVGMTQSVREIPGLLTLLVVFVLMF
MREHKLAALSVLLLGLGTGITALIPSYGWVIFTTVVMSFGFHYYESTNQSLTLQYFSTAVSPIVFGRLRALAAVSSVVAG
IMVYCLSSVVQYRGMYLAIGAVVVIAGLWGLCQNPTHSGIVPQRKKMILRRRYSLFYILTLLSGARRQIFVVFSILLLVQ
VFHFTVREMTILFIVNNIVAYILNSLIGKAINRFGERFISSCEYAGVIVIFLVYAFSTSKYLVMFMYILDNILYNFEVSI
RTYFQKVADPADISSSMSVGFTINHIAAVFLPALGGYFWMLDYRIPFIGGTVLGVISLIAAQWMRVPEKAPKAETSAS

Sequences:

>Translated_398_residues
MKRLLGKIDEGLLTSEQRPMLRFLIILTAASTIGLQGYTILFNNFAAEMVHLDGSQVGMTQSVREIPGLLTLLVVFVLMF
MREHKLAALSVLLLGLGTGITALIPSYGWVIFTTVVMSFGFHYYESTNQSLTLQYFSTAVSPIVFGRLRALAAVSSVVAG
IMVYCLSSVVQYRGMYLAIGAVVVIAGLWGLCQNPTHSGIVPQRKKMILRRRYSLFYILTLLSGARRQIFVVFSILLLVQ
VFHFTVREMTILFIVNNIVAYILNSLIGKAINRFGERFISSCEYAGVIVIFLVYAFSTSKYLVMFMYILDNILYNFEVSI
RTYFQKVADPADISSSMSVGFTINHIAAVFLPALGGYFWMLDYRIPFIGGTVLGVISLIAAQWMRVPEKAPKAETSAS
>Mature_398_residues
MKRLLGKIDEGLLTSEQRPMLRFLIILTAASTIGLQGYTILFNNFAAEMVHLDGSQVGMTQSVREIPGLLTLLVVFVLMF
MREHKLAALSVLLLGLGTGITALIPSYGWVIFTTVVMSFGFHYYESTNQSLTLQYFSTAVSPIVFGRLRALAAVSSVVAG
IMVYCLSSVVQYRGMYLAIGAVVVIAGLWGLCQNPTHSGIVPQRKKMILRRRYSLFYILTLLSGARRQIFVVFSILLLVQ
VFHFTVREMTILFIVNNIVAYILNSLIGKAINRFGERFISSCEYAGVIVIFLVYAFSTSKYLVMFMYILDNILYNFEVSI
RTYFQKVADPADISSSMSVGFTINHIAAVFLPALGGYFWMLDYRIPFIGGTVLGVISLIAAQWMRVPEKAPKAETSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44311; Mature: 44311

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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HHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA