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The map label for this gene is fadF [H]

Identifier: 197118469

GI number: 197118469

Start: 2412448

End: 2414439

Strand: Direct

Name: fadF [H]

Synonym: Gbem_2087

Alternate gene names: 197118469

Gene position: 2412448-2414439 (Clockwise)

Preceding gene: 197118468

Following gene: 197118471

Centisome position: 52.27

GC content: 60.59

Gene sequence:

>1992_bases
ATGGAACATACTTTTTTCGCTGTCCTGCTGTCGCTTTCCATGGCTGCTTTTGCCTTCAGTTGTTACCGCCGGCTGGCGCT
GGTGGCCATCGGGAAGGAGGAATACCGCTTCGACCAGCCGCAGGCCCGTTTCAAGGAGATGCTCGTCTACGCCTTCGGGC
AGAAAAGGGTGATGAGCCGCCCCTTCGGCCTCAACCACGGGGTCATCTTCTGGGCCTTCCTGGTACTCGCGGTGGCAAAC
GTTGAATTCCTTGTGTCAGGCATACTGCCGGGCCTCTCTTTTGCGCTTTTGCCTGAACCTTTGCACGGCACGCTCGCGTT
TGTGTTCGAAATCTGCTCGCTGGTGGTACTGGTCGCGGTGGCTGTCGCCGCCGTGCGCCGCAGCATAAACCCGCCGTTCC
CGGGGGCGCGTACCTTCGAGGCCTACTTCATCCTCTCCATGATCGCCATCCTTATGTTGGCCTACTTCGGGATGAATGGC
GCCCTTATCGCTTCCGGTGCGCGCGAGTCCACCTACCTTACCCCGGTGTCAAACCTCTGCGCCAGCCTGCTCTCCTGGAC
CCTAGCCGACGCCCAGCTGAATCTCGCCGCCAGGGTGTTCTGGTGGATTCATGCCGTGGTGTTGCTGGGGTTCATGAACT
ATCTTCCCTACAGCAAGCACATGCACATACTTACCGCCATACCTAATGTCTTCTTGCGGAACATGGGCAAGAGCAACACG
CAGCCCCGCGAGGAATTCTGCGAGGGGAACAGCTTCGGAGCGGCAACCGTTGACCAGCTCACCTGGAAGGACCTGCTCGA
TTCCTTCTCCTGTACCGAATGCGGCCGCTGCCAGGACTCCTGTCCGGCAGCAACCACAGGAAAGACGCTCAACCCGCGGG
AGGTGATTCATGCCATGAAAGAGAACCTGCTGCAAAACGGGACCGTGCTGGAGAAGCTTGCTGGAGACGCTCAGGCGGAA
CGAGCCGTCTCGCTGATAGGGGAGGGGAAGAAGGGAGCGACCCCGGAATCCGCCCTTTGGAGCTGCACTTCCTGCGGCGC
CTGCATGGAGGCGTGCCCGGTCTTCATCGAGCATCTGCCGAAGATCGTGAAGATGCGGCGGCACTTGGTGCAGATGGAGG
CGAAGTTCCCCGACGAGCTTTTGAACTTATTCGAGAATATGGAGCAGCGCTCTAACCCCTGGGGGATGGCCCCGTCGGAA
AGGAGCAAGTGGAGCTCTCAGCTGGAGCTACGCCCTTTCGTGGCGGGAGAGACTGAGTACCTCCTCTTCGTCGGCTGCTC
GGGCGCCTTCGATGCCAGGAACAAGCAGGTGAGCGTCGCCCTGACCCGGGTGTTGGACGCTGCGGGCGTTTCCTATGGCG
TCCTGGGCAGGGATGAGAAATGTTGCGGCGAGAGCGTGCGCAGGTTGGGCAACGAATACCTCTTCGACCTGATGGCGCGG
GAAAGCGTGGCGCAGTTCCGGGAGAAGGGGGTAACCAAGGTCATCGCTCAGTGCCCTCATTGCTACAACACGCTCAAGAA
CGATTTCCGGCAGTTCGGGCTGGAGCTGGAGGTGCTGCATCACAGCGAGTTGATCGCCGGGCTTCTTGCTTCGGGTGAGC
TGCAACTGGAGGGAAGGATGGAGGAGTTGGGAAACCTGGTCCTGCACGACTCCTGCTACCTGGGGCGCCATAACGACGTT
TACCAGCCCCCGCGCTCGGTGGTACAGGCGGTAACCGGTAAGGCAGCAGGCGAAATGGAGCGCAGCCGCGATAAAGCCTT
TTGCTGCGGCGCCGGCGGTGGGCGGATGTGGCTTGAGGAGCACGAGGGAACACCGATCAACCGGGCGCGCGTCGCGGAGG
CGCTGGCGTTGAAACCGGATACCATCTGCGTCAGCTGCCCTTTCTGCATGACTATGTTCGAAGACGGGGTGAAGGAGGTG
CCTGGCACCGGGGTTCAGGTAAGAGACTTGGCCGAGTTGGTGGCCCAGGCCCTCCCCAAGACATCAAAATAA

Upstream 100 bases:

>100_bases
TTTCGAGGTGGTGCCGGCCCTGACTGCCCGGGTGCGGGAAATGAAACAGCTGAGAAGCTGAAGCGCAAGTAAACCTTCGA
TCCTGCCGGGAGTCATACCT

Downstream 100 bases:

>100_bases
AGAAGCGTTGCGCTTGGAAGGTGTTTCCTCCAGCCACTTCATGACGGAGAAGGCATGGTCCTCTTTCATGTACTGGTTGG
AGTAGAGATACACCGCCTGG

Product: iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MEHTFFAVLLSLSMAAFAFSCYRRLALVAIGKEEYRFDQPQARFKEMLVYAFGQKRVMSRPFGLNHGVIFWAFLVLAVAN
VEFLVSGILPGLSFALLPEPLHGTLAFVFEICSLVVLVAVAVAAVRRSINPPFPGARTFEAYFILSMIAILMLAYFGMNG
ALIASGARESTYLTPVSNLCASLLSWTLADAQLNLAARVFWWIHAVVLLGFMNYLPYSKHMHILTAIPNVFLRNMGKSNT
QPREEFCEGNSFGAATVDQLTWKDLLDSFSCTECGRCQDSCPAATTGKTLNPREVIHAMKENLLQNGTVLEKLAGDAQAE
RAVSLIGEGKKGATPESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQMEAKFPDELLNLFENMEQRSNPWGMAPSE
RSKWSSQLELRPFVAGETEYLLFVGCSGAFDARNKQVSVALTRVLDAAGVSYGVLGRDEKCCGESVRRLGNEYLFDLMAR
ESVAQFREKGVTKVIAQCPHCYNTLKNDFRQFGLELEVLHHSELIAGLLASGELQLEGRMEELGNLVLHDSCYLGRHNDV
YQPPRSVVQAVTGKAAGEMERSRDKAFCCGAGGGRMWLEEHEGTPINRARVAEALALKPDTICVSCPFCMTMFEDGVKEV
PGTGVQVRDLAELVAQALPKTSK

Sequences:

>Translated_663_residues
MEHTFFAVLLSLSMAAFAFSCYRRLALVAIGKEEYRFDQPQARFKEMLVYAFGQKRVMSRPFGLNHGVIFWAFLVLAVAN
VEFLVSGILPGLSFALLPEPLHGTLAFVFEICSLVVLVAVAVAAVRRSINPPFPGARTFEAYFILSMIAILMLAYFGMNG
ALIASGARESTYLTPVSNLCASLLSWTLADAQLNLAARVFWWIHAVVLLGFMNYLPYSKHMHILTAIPNVFLRNMGKSNT
QPREEFCEGNSFGAATVDQLTWKDLLDSFSCTECGRCQDSCPAATTGKTLNPREVIHAMKENLLQNGTVLEKLAGDAQAE
RAVSLIGEGKKGATPESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQMEAKFPDELLNLFENMEQRSNPWGMAPSE
RSKWSSQLELRPFVAGETEYLLFVGCSGAFDARNKQVSVALTRVLDAAGVSYGVLGRDEKCCGESVRRLGNEYLFDLMAR
ESVAQFREKGVTKVIAQCPHCYNTLKNDFRQFGLELEVLHHSELIAGLLASGELQLEGRMEELGNLVLHDSCYLGRHNDV
YQPPRSVVQAVTGKAAGEMERSRDKAFCCGAGGGRMWLEEHEGTPINRARVAEALALKPDTICVSCPFCMTMFEDGVKEV
PGTGVQVRDLAELVAQALPKTSK
>Mature_663_residues
MEHTFFAVLLSLSMAAFAFSCYRRLALVAIGKEEYRFDQPQARFKEMLVYAFGQKRVMSRPFGLNHGVIFWAFLVLAVAN
VEFLVSGILPGLSFALLPEPLHGTLAFVFEICSLVVLVAVAVAAVRRSINPPFPGARTFEAYFILSMIAILMLAYFGMNG
ALIASGARESTYLTPVSNLCASLLSWTLADAQLNLAARVFWWIHAVVLLGFMNYLPYSKHMHILTAIPNVFLRNMGKSNT
QPREEFCEGNSFGAATVDQLTWKDLLDSFSCTECGRCQDSCPAATTGKTLNPREVIHAMKENLLQNGTVLEKLAGDAQAE
RAVSLIGEGKKGATPESALWSCTSCGACMEACPVFIEHLPKIVKMRRHLVQMEAKFPDELLNLFENMEQRSNPWGMAPSE
RSKWSSQLELRPFVAGETEYLLFVGCSGAFDARNKQVSVALTRVLDAAGVSYGVLGRDEKCCGESVRRLGNEYLFDLMAR
ESVAQFREKGVTKVIAQCPHCYNTLKNDFRQFGLELEVLHHSELIAGLLASGELQLEGRMEELGNLVLHDSCYLGRHNDV
YQPPRSVVQAVTGKAAGEMERSRDKAFCCGAGGGRMWLEEHEGTPINRARVAEALALKPDTICVSCPFCMTMFEDGVKEV
PGTGVQVRDLAELVAQALPKTSK

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73141; Mature: 73141

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTFFAVLLSLSMAAFAFSCYRRLALVAIGKEEYRFDQPQARFKEMLVYAFGQKRVMSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PFGLNHGVIFWAFLVLAVANVEFLVSGILPGLSFALLPEPLHGTLAFVFEICSLVVLVAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AVAAVRRSINPPFPGARTFEAYFILSMIAILMLAYFGMNGALIASGARESTYLTPVSNLC
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECHHHHHH
ASLLSWTLADAQLNLAARVFWWIHAVVLLGFMNYLPYSKHMHILTAIPNVFLRNMGKSNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
QPREEFCEGNSFGAATVDQLTWKDLLDSFSCTECGRCQDSCPAATTGKTLNPREVIHAMK
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ENLLQNGTVLEKLAGDAQAERAVSLIGEGKKGATPESALWSCTSCGACMEACPVFIEHLP
HHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIVKMRRHLVQMEAKFPDELLNLFENMEQRSNPWGMAPSERSKWSSQLELRPFVAGETEY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEECCCCCE
LLFVGCSGAFDARNKQVSVALTRVLDAAGVSYGVLGRDEKCCGESVRRLGNEYLFDLMAR
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESVAQFREKGVTKVIAQCPHCYNTLKNDFRQFGLELEVLHHSELIAGLLASGELQLEGRM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEECCHH
EELGNLVLHDSCYLGRHNDVYQPPRSVVQAVTGKAAGEMERSRDKAFCCGAGGGRMWLEE
HHHCCEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
HEGTPINRARVAEALALKPDTICVSCPFCMTMFEDGVKEVPGTGVQVRDLAELVAQALPK
CCCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
TSK
CCC
>Mature Secondary Structure
MEHTFFAVLLSLSMAAFAFSCYRRLALVAIGKEEYRFDQPQARFKEMLVYAFGQKRVMSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PFGLNHGVIFWAFLVLAVANVEFLVSGILPGLSFALLPEPLHGTLAFVFEICSLVVLVAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AVAAVRRSINPPFPGARTFEAYFILSMIAILMLAYFGMNGALIASGARESTYLTPVSNLC
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECHHHHHH
ASLLSWTLADAQLNLAARVFWWIHAVVLLGFMNYLPYSKHMHILTAIPNVFLRNMGKSNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
QPREEFCEGNSFGAATVDQLTWKDLLDSFSCTECGRCQDSCPAATTGKTLNPREVIHAMK
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ENLLQNGTVLEKLAGDAQAERAVSLIGEGKKGATPESALWSCTSCGACMEACPVFIEHLP
HHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIVKMRRHLVQMEAKFPDELLNLFENMEQRSNPWGMAPSERSKWSSQLELRPFVAGETEY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEECCCCCE
LLFVGCSGAFDARNKQVSVALTRVLDAAGVSYGVLGRDEKCCGESVRRLGNEYLFDLMAR
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESVAQFREKGVTKVIAQCPHCYNTLKNDFRQFGLELEVLHHSELIAGLLASGELQLEGRM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEECCHH
EELGNLVLHDSCYLGRHNDVYQPPRSVVQAVTGKAAGEMERSRDKAFCCGAGGGRMWLEE
HHHCCEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
HEGTPINRARVAEALALKPDTICVSCPFCMTMFEDGVKEVPGTGVQVRDLAELVAQALPK
CCCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
TSK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]