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The map label for this gene is hybB-2 [H]

Identifier: 197118366

GI number: 197118366

Start: 2286927

End: 2288171

Strand: Direct

Name: hybB-2 [H]

Synonym: Gbem_1984

Alternate gene names: 197118366

Gene position: 2286927-2288171 (Clockwise)

Preceding gene: 197118365

Following gene: 197118367

Centisome position: 49.55

GC content: 62.25

Gene sequence:

>1245_bases
ATGAGCACCGACAGCAAAAGAACGGACCCGGCAAGGGGGCCGCTTTTTACCAAGCCGTTTATCGTCCTTTTGTTCCTGTC
GCTGGCCGGCCTCTTCTTCATCGGGGTCCGTTTCGTCAAGGGGATCGGGGCGGTCTCCAATCTGAGCGACGGCTACCCCT
GGGGGATCTGGGTCGCCTACGACGTGGCGATCGGCACCGCGGTCACCTGCGGCGGTTTCGCCGTCGCCCTTTTGAGCTAC
CTCATGCACCGCGGCGCTTACCATTCCCTGGTGAAGTCCGCGATCCTCACCAGCCTCTTCGGCGCCTTCCTGGCTGCCTC
CTCCATCGTGGTCGAGATAGGGCGCCCCTGGAACGCCCACGGCTTCTTCGCGCCGACCAGCTGGCAGCCGAACTCCGCCT
TTTTCGAACTCACCCTTTGCGCCGCCGGATACCTGGTGGCCGAGGTGATCGAGTATCTTCCCGCCATCGTACCCATGCTT
GGGCGCGGCAACCCGACCTCGCTCCGCACGCTTTTGTTCAATTTCTTAAAGGCGCGCGGGATGGTGCGGGTTTCCCCGGA
GAGCGGTGCCGTTCCCACCGGGCTCTTGCGATGCAGGATCAACCAGCTCCTGATCCTCATCGCACTGGCGGGTATCGTGC
TCCCCACCATGCACCAATCCGCGCTCGGCTCCCTGATGCTCATCGCCTCGACCAAGCTGCATCCTCTTTGGCACGGCCCC
TTTTTGCCGCTTCTTTTCCTGATCAACTGCATCTACATCGGCTACGCCATCGTGGTCTTCGAATCGATTCTCGCCAGCTT
CGTCCAGGCCCGCCCCTTCAGAAGCGCCGACCTCGCCGCCGCTGCCGCCCTCATCCCCTGGCTTTCCGGCGCGTGGCTCG
TGGTGCGGCTTGGGGATCTGGTGAACCGGGGACAGATCGAGGCCGTTTTCCACGGGGATTTCTACTCCGCCTTCTTCCTG
GCCGAGTGCTTATTGATGACCATCGGTTCCGCGCCGCTTTTCAACCGCCGCAAGCGGCAGTCGCCCCGCCGGCTCTTCAT
CTCCGCAAGCATGATGCTTCTTGGGGGCGGCCTCTACCGCTTCAACGTCTACCTGATCGGCTTCAACCCCGGCAATGGCT
GGCATTACTTTCCTTCCTTCGCGGAAGTGACCATCTCGGCCGGGATCGTCTCGCTCGAGATTCTTATCTACCAGGTGCTC
ATCAAGTTGCTTCCGCCCATTCCCGCCGAGCGCGCAGGGTATTGA

Upstream 100 bases:

>100_bases
CCTTTTTACGTCCGGGGTCCGTTTTCCCGGAAGATGTTGACACCCCGCACGCTCTCCCATTAAACTGCTCGCTGTTTTCG
TTTCATGAGGCGGGGGATCC

Downstream 100 bases:

>100_bases
AGATTGCTTTGCCGTGGCACTTTTGTTAATATGGCGCGCGGAAACGCACCAAGACGCAGTTCGCGCCGAGAAAGGAGGGG
GTTTTTGAGAACCGCCAGCC

Product: putative hydrogenase 2 b cytochrome subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSTDSKRTDPARGPLFTKPFIVLLFLSLAGLFFIGVRFVKGIGAVSNLSDGYPWGIWVAYDVAIGTAVTCGGFAVALLSY
LMHRGAYHSLVKSAILTSLFGAFLAASSIVVEIGRPWNAHGFFAPTSWQPNSAFFELTLCAAGYLVAEVIEYLPAIVPML
GRGNPTSLRTLLFNFLKARGMVRVSPESGAVPTGLLRCRINQLLILIALAGIVLPTMHQSALGSLMLIASTKLHPLWHGP
FLPLLFLINCIYIGYAIVVFESILASFVQARPFRSADLAAAAALIPWLSGAWLVVRLGDLVNRGQIEAVFHGDFYSAFFL
AECLLMTIGSAPLFNRRKRQSPRRLFISASMMLLGGGLYRFNVYLIGFNPGNGWHYFPSFAEVTISAGIVSLEILIYQVL
IKLLPPIPAERAGY

Sequences:

>Translated_414_residues
MSTDSKRTDPARGPLFTKPFIVLLFLSLAGLFFIGVRFVKGIGAVSNLSDGYPWGIWVAYDVAIGTAVTCGGFAVALLSY
LMHRGAYHSLVKSAILTSLFGAFLAASSIVVEIGRPWNAHGFFAPTSWQPNSAFFELTLCAAGYLVAEVIEYLPAIVPML
GRGNPTSLRTLLFNFLKARGMVRVSPESGAVPTGLLRCRINQLLILIALAGIVLPTMHQSALGSLMLIASTKLHPLWHGP
FLPLLFLINCIYIGYAIVVFESILASFVQARPFRSADLAAAAALIPWLSGAWLVVRLGDLVNRGQIEAVFHGDFYSAFFL
AECLLMTIGSAPLFNRRKRQSPRRLFISASMMLLGGGLYRFNVYLIGFNPGNGWHYFPSFAEVTISAGIVSLEILIYQVL
IKLLPPIPAERAGY
>Mature_413_residues
STDSKRTDPARGPLFTKPFIVLLFLSLAGLFFIGVRFVKGIGAVSNLSDGYPWGIWVAYDVAIGTAVTCGGFAVALLSYL
MHRGAYHSLVKSAILTSLFGAFLAASSIVVEIGRPWNAHGFFAPTSWQPNSAFFELTLCAAGYLVAEVIEYLPAIVPMLG
RGNPTSLRTLLFNFLKARGMVRVSPESGAVPTGLLRCRINQLLILIALAGIVLPTMHQSALGSLMLIASTKLHPLWHGPF
LPLLFLINCIYIGYAIVVFESILASFVQARPFRSADLAAAAALIPWLSGAWLVVRLGDLVNRGQIEAVFHGDFYSAFFLA
ECLLMTIGSAPLFNRRKRQSPRRLFISASMMLLGGGLYRFNVYLIGFNPGNGWHYFPSFAEVTISAGIVSLEILIYQVLI
KLLPPIPAERAGY

Specific function: Probable b-type cytochrome [H]

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI2367183, Length=410, Percent_Identity=37.0731707317073, Blast_Score=238, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 45081; Mature: 44950

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDSKRTDPARGPLFTKPFIVLLFLSLAGLFFIGVRFVKGIGAVSNLSDGYPWGIWVAY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEE
DVAIGTAVTCGGFAVALLSYLMHRGAYHSLVKSAILTSLFGAFLAASSIVVEIGRPWNAH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
GFFAPTSWQPNSAFFELTLCAAGYLVAEVIEYLPAIVPMLGRGNPTSLRTLLFNFLKARG
CCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
MVRVSPESGAVPTGLLRCRINQLLILIALAGIVLPTMHQSALGSLMLIASTKLHPLWHGP
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
FLPLLFLINCIYIGYAIVVFESILASFVQARPFRSADLAAAAALIPWLSGAWLVVRLGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
VNRGQIEAVFHGDFYSAFFLAECLLMTIGSAPLFNRRKRQSPRRLFISASMMLLGGGLYR
HCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEHHHHHHHHHCCCEEE
FNVYLIGFNPGNGWHYFPSFAEVTISAGIVSLEILIYQVLIKLLPPIPAERAGY
EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STDSKRTDPARGPLFTKPFIVLLFLSLAGLFFIGVRFVKGIGAVSNLSDGYPWGIWVAY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEE
DVAIGTAVTCGGFAVALLSYLMHRGAYHSLVKSAILTSLFGAFLAASSIVVEIGRPWNAH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
GFFAPTSWQPNSAFFELTLCAAGYLVAEVIEYLPAIVPMLGRGNPTSLRTLLFNFLKARG
CCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
MVRVSPESGAVPTGLLRCRINQLLILIALAGIVLPTMHQSALGSLMLIASTKLHPLWHGP
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
FLPLLFLINCIYIGYAIVVFESILASFVQARPFRSADLAAAAALIPWLSGAWLVVRLGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
VNRGQIEAVFHGDFYSAFFLAECLLMTIGSAPLFNRRKRQSPRRLFISASMMLLGGGLYR
HCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEHHHHHHHHHCCCEEE
FNVYLIGFNPGNGWHYFPSFAEVTISAGIVSLEILIYQVLIKLLPPIPAERAGY
EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8021226; 9278503 [H]