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The map label for this gene is 197118367

Identifier: 197118367

GI number: 197118367

Start: 2288256

End: 2288837

Strand: Direct

Name: 197118367

Synonym: Gbem_1985

Alternate gene names: NA

Gene position: 2288256-2288837 (Clockwise)

Preceding gene: 197118366

Following gene: 197118368

Centisome position: 49.58

GC content: 62.71

Gene sequence:

>582_bases
TTGAGAACCGCCAGCCGCATCATCGCTCTATGCTCGTCCTGCCTTATTTTCCTGGCCCTGCCGGTACACGCGCAGCCCCC
TTCACCTCATCCTGTCAGCGTCCTTGAAGGGCTCGTGGTCGGAGTCGCCGAGGGCGACCGGCTCACGGTCAATTCCTTCG
GCACCGAGATCCCGGTCCGCCTCTACGGGATTGCCGCGCCCCAGACCGCCAAGGTGGACAAGTTCACCGGCTGGTACAAA
CCGGGGCAGCCTTATGCCGAGGATGCCTTCCGGGCCCTCTCCATCAAGGTCCTGCACCAGCAGGTCAAGGTGGTGATCCA
CAGCACATTGCTTTCCAAGACGGACCCCACCCAGGTCGCCGTAGCGGTGGTGTATCTCGACGGCCGCAACATCAACATGG
AGATGCTGGGGGACGGTTGGGCCTGGGCGGACGGCAGGTTTTTGAGCAGGGTCGACCACCCCCGCTACATGACCGCCGAG
CGCATCGCCCGTAACAGGAAAAACGGGCTCTGGGCCCAGGAAAACCCGCAGCCCCCCTGGAACTTCAAGCCGCAGATAAA
GATTCGGCCCAAGCAGAACTGA

Upstream 100 bases:

>100_bases
GCGCGCAGGGTATTGAAGATTGCTTTGCCGTGGCACTTTTGTTAATATGGCGCGCGGAAACGCACCAAGACGCAGTTCGC
GCCGAGAAAGGAGGGGGTTT

Downstream 100 bases:

>100_bases
TCACCCCCCTCTAGCACGTCCTCTCCTGCAATTTAATGCCGTGTTTACAGCTGAATAGAAAATGCCGCACCCCTGGAGGC
CGGCCGCAACGCTGAGATCC

Product: SNase-like nuclease

Products: NA

Alternate protein names: SNase-Like Nuclease

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRTASRIIALCSSCLIFLALPVHAQPPSPHPVSVLEGLVVGVAEGDRLTVNSFGTEIPVRLYGIAAPQTAKVDKFTGWYK
PGQPYAEDAFRALSIKVLHQQVKVVIHSTLLSKTDPTQVAVAVVYLDGRNINMEMLGDGWAWADGRFLSRVDHPRYMTAE
RIARNRKNGLWAQENPQPPWNFKPQIKIRPKQN

Sequences:

>Translated_193_residues
MRTASRIIALCSSCLIFLALPVHAQPPSPHPVSVLEGLVVGVAEGDRLTVNSFGTEIPVRLYGIAAPQTAKVDKFTGWYK
PGQPYAEDAFRALSIKVLHQQVKVVIHSTLLSKTDPTQVAVAVVYLDGRNINMEMLGDGWAWADGRFLSRVDHPRYMTAE
RIARNRKNGLWAQENPQPPWNFKPQIKIRPKQN
>Mature_193_residues
MRTASRIIALCSSCLIFLALPVHAQPPSPHPVSVLEGLVVGVAEGDRLTVNSFGTEIPVRLYGIAAPQTAKVDKFTGWYK
PGQPYAEDAFRALSIKVLHQQVKVVIHSTLLSKTDPTQVAVAVVYLDGRNINMEMLGDGWAWADGRFLSRVDHPRYMTAE
RIARNRKNGLWAQENPQPPWNFKPQIKIRPKQN

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21534; Mature: 21534

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTASRIIALCSSCLIFLALPVHAQPPSPHPVSVLEGLVVGVAEGDRLTVNSFGTEIPVR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCEEEECCCCCCCCEE
LYGIAAPQTAKVDKFTGWYKPGQPYAEDAFRALSIKVLHQQVKVVIHSTLLSKTDPTQVA
EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VAVVYLDGRNINMEMLGDGWAWADGRFLSRVDHPRYMTAERIARNRKNGLWAQENPQPPW
EEEEEECCCCCEEEEECCCEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
NFKPQIKIRPKQN
CCCCCEEECCCCC
>Mature Secondary Structure
MRTASRIIALCSSCLIFLALPVHAQPPSPHPVSVLEGLVVGVAEGDRLTVNSFGTEIPVR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCEEEECCCCCCCCEE
LYGIAAPQTAKVDKFTGWYKPGQPYAEDAFRALSIKVLHQQVKVVIHSTLLSKTDPTQVA
EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VAVVYLDGRNINMEMLGDGWAWADGRFLSRVDHPRYMTAERIARNRKNGLWAQENPQPPW
EEEEEECCCCCEEEEECCCEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
NFKPQIKIRPKQN
CCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA