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The map label for this gene is 197118348

Identifier: 197118348

GI number: 197118348

Start: 2269618

End: 2270184

Strand: Reverse

Name: 197118348

Synonym: Gbem_1965

Alternate gene names: NA

Gene position: 2270184-2269618 (Counterclockwise)

Preceding gene: 197118351

Following gene: 197118347

Centisome position: 49.19

GC content: 55.73

Gene sequence:

>567_bases
ATGAGACAAGCAACCGGGACATACGTCATGCTGCTCTTGGTGGCCGGACTGGCAACGGGAGATCTAGACCCGAAACCGCA
ACGGCAGCCGATCGACCAGGAGGAATACCTGGAGGCGGACGACTGGTTCGAAGCGGGGGTACTCATGAACAGCGAGGGGC
GCTACGGCGAAGCGGCCGAGGCCTTCAGCAAAAGCATCGCCCTTTCTCCCGGGAACGCCGTCTCCTGGCTCAACTTGGGG
ACCGCCCAAGCGCTTACCGCGGACTACCCTCGCGCCATCGAATCCCTCAAAAGATCAATAGCACTGGATCCAAAGCTAGC
CCTCGCCTTTTCCAATTTAGGGGAAGTCTGTTTCAGGATCTACCGCTATGAGGAAGCCGTCGAAGCTTACACTTACCTGC
TGGAGTTATGGCCCGGCAATGCCAATGCCCTCTATAAGCTGGGACTGTCACATCTGTTTCTGAACCAGTGGGGGAAAGCA
CAGGCCGAGTACCTCACACTGAAACTTGTCGACCCGGAACTGGCAGAAAAGTTGAAAAACGCTATTATCCAGAGTAGTAG
TGATTAG

Upstream 100 bases:

>100_bases
AGCAAAATTGCCGTCATGCAACCGCCTGGCCTTGCTTTTCAGGTTTCTTTTAAATAAATTTTAATATGTTAAGGTTTACC
TTTCCGCGGGGGGGACCCAC

Downstream 100 bases:

>100_bases
AATGGAGGGATTTCATGCGCTATTCACCGCTGCTCACCGACCTTTACGAGTTGACCATGCTGGCAGGTTACCTGGACCAA
GGGATGCAAGAGCATCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeats Containing Protein; TPR Repeat Protein; Peptidase; Serine/Threonine Protein Kinase With TPR Repeats; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAEAFSKSIALSPGNAVSWLNLG
TAQALTADYPRAIESLKRSIALDPKLALAFSNLGEVCFRIYRYEEAVEAYTYLLELWPGNANALYKLGLSHLFLNQWGKA
QAEYLTLKLVDPELAEKLKNAIIQSSSD

Sequences:

>Translated_188_residues
MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAEAFSKSIALSPGNAVSWLNLG
TAQALTADYPRAIESLKRSIALDPKLALAFSNLGEVCFRIYRYEEAVEAYTYLLELWPGNANALYKLGLSHLFLNQWGKA
QAEYLTLKLVDPELAEKLKNAIIQSSSD
>Mature_188_residues
MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAEAFSKSIALSPGNAVSWLNLG
TAQALTADYPRAIESLKRSIALDPKLALAFSNLGEVCFRIYRYEEAVEAYTYLLELWPGNANALYKLGLSHLFLNQWGKA
QAEYLTLKLVDPELAEKLKNAIIQSSSD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20810; Mature: 20810

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCEEECCCCCCCHHHH
AFSKSIALSPGNAVSWLNLGTAQALTADYPRAIESLKRSIALDPKLALAFSNLGEVCFRI
HHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YRYEEAVEAYTYLLELWPGNANALYKLGLSHLFLNQWGKAQAEYLTLKLVDPELAEKLKN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH
AIIQSSSD
HHHCCCCC
>Mature Secondary Structure
MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCEEECCCCCCCHHHH
AFSKSIALSPGNAVSWLNLGTAQALTADYPRAIESLKRSIALDPKLALAFSNLGEVCFRI
HHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YRYEEAVEAYTYLLELWPGNANALYKLGLSHLFLNQWGKAQAEYLTLKLVDPELAEKLKN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH
AIIQSSSD
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA