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The map label for this gene is cpaB-2

Identifier: 197118221

GI number: 197118221

Start: 2134348

End: 2135217

Strand: Reverse

Name: cpaB-2

Synonym: Gbem_1837

Alternate gene names: NA

Gene position: 2135217-2134348 (Counterclockwise)

Preceding gene: 197118222

Following gene: 197118220

Centisome position: 46.27

GC content: 58.85

Gene sequence:

>870_bases
ATGACCAGACCGAGTGCCATGACCACGGTAACCATAATTGCACTTCTGCTTGGTGGACTCGCAACCATTATGGCGAACAA
CTACCTCAAGAAGCAGGCGGACAAGCCATACGAGGGTGTGCCGATAGCATCCGCTGCCGTGGATCTTCCCCTGGGCTCGA
AGCTGAATGCCACCCAGGTCAAGCTGGCAACCTGGCCTAAGGACGCTTTGCCTGCAGGCGGCTACCAGGACTACAAACCC
TTGGTAGGGCGGATCGTGGTGCGTCCCTTGAGCGCGGGAGAAGTCATAACAGAGAACAAGCTCATGCCGCTCAATTCTTC
CGGCGGCATCATGACGTACATGGTGCCTGACGGACACCGTGCGGTGACAGTCTCTGTCAACGAGGTCGCCGGGGTGGCGG
GTTTCATCACCCCCAACAGCAGGGTCGATGTTCTGCTCACCATACCGCGACCAGGAAGCACCAACGAACGGGACAACATC
AGCAAGATAATCCTGCAGAATGTTCCGGTGCTGGCAACAGGGCAGGTCACCGAGCAAAAGGAAGGCGGCAAGCCGGGGGT
CGTGCCGACGGTGACGCTGGACGTGACTCCCATAGAAGCGGAGAAGCTCATCGTCGGCACCAAAAAGGGATCCCTGCAAT
TACTCCTTAGGAACGTGATCGATGTTGCTTCCGTCGACACGAAGGGCGCCACGGTATCCAGGGCACTGGGGGGGACCGAG
ACACTGCAGCGCGCGTTGGTAGTTCGTCATGCTCCGGCCCGCACCAAGGTGGCGGCTGCCAAGCCGGCTGCTACCCCTGC
GCCGGCTAAATTTACGATGGAGGTCATCAAAGGGGGAACTAAGTCTGTCCGCGAGTTTGTACAGGACTAG

Upstream 100 bases:

>100_bases
AATTTATGTATCCACTTACCTCGAAATTGAACATCACCTTAACCGGTCAAGCATCTATGTTCTATGAGTAAGGGATAACA
GCAATAAATTCGGAGGGACC

Downstream 100 bases:

>100_bases
AGGCCGCTTGCGATAAGCAACTCCATCGACCGCTGGGATGTTATTTTCCATTTCTTATGACGAGGTGACAGGATGGAACC
GTTCGCAACCGGAAGGAAAG

Product: Flp pilus assembly protein CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; Flp Pilus Assembly CpaB Domain Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; CpaB Pilus Assembly Protein; SAF Domain Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTRPSAMTTVTIIALLLGGLATIMANNYLKKQADKPYEGVPIASAAVDLPLGSKLNATQVKLATWPKDALPAGGYQDYKP
LVGRIVVRPLSAGEVITENKLMPLNSSGGIMTYMVPDGHRAVTVSVNEVAGVAGFITPNSRVDVLLTIPRPGSTNERDNI
SKIILQNVPVLATGQVTEQKEGGKPGVVPTVTLDVTPIEAEKLIVGTKKGSLQLLLRNVIDVASVDTKGATVSRALGGTE
TLQRALVVRHAPARTKVAAAKPAATPAPAKFTMEVIKGGTKSVREFVQD

Sequences:

>Translated_289_residues
MTRPSAMTTVTIIALLLGGLATIMANNYLKKQADKPYEGVPIASAAVDLPLGSKLNATQVKLATWPKDALPAGGYQDYKP
LVGRIVVRPLSAGEVITENKLMPLNSSGGIMTYMVPDGHRAVTVSVNEVAGVAGFITPNSRVDVLLTIPRPGSTNERDNI
SKIILQNVPVLATGQVTEQKEGGKPGVVPTVTLDVTPIEAEKLIVGTKKGSLQLLLRNVIDVASVDTKGATVSRALGGTE
TLQRALVVRHAPARTKVAAAKPAATPAPAKFTMEVIKGGTKSVREFVQD
>Mature_288_residues
TRPSAMTTVTIIALLLGGLATIMANNYLKKQADKPYEGVPIASAAVDLPLGSKLNATQVKLATWPKDALPAGGYQDYKPL
VGRIVVRPLSAGEVITENKLMPLNSSGGIMTYMVPDGHRAVTVSVNEVAGVAGFITPNSRVDVLLTIPRPGSTNERDNIS
KIILQNVPVLATGQVTEQKEGGKPGVVPTVTLDVTPIEAEKLIVGTKKGSLQLLLRNVIDVASVDTKGATVSRALGGTET
LQRALVVRHAPARTKVAAAKPAATPAPAKFTMEVIKGGTKSVREFVQD

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30327; Mature: 30196

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPSAMTTVTIIALLLGGLATIMANNYLKKQADKPYEGVPIASAAVDLPLGSKLNATQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCCCCCEE
KLATWPKDALPAGGYQDYKPLVGRIVVRPLSAGEVITENKLMPLNSSGGIMTYMVPDGHR
EEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEECCCEEEECCCCCEEEEEECCCCE
AVTVSVNEVAGVAGFITPNSRVDVLLTIPRPGSTNERDNISKIILQNVPVLATGQVTEQK
EEEEEHHHHCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHC
EGGKPGVVPTVTLDVTPIEAEKLIVGTKKGSLQLLLRNVIDVASVDTKGATVSRALGGTE
CCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
TLQRALVVRHAPARTKVAAAKPAATPAPAKFTMEVIKGGTKSVREFVQD
HHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
TRPSAMTTVTIIALLLGGLATIMANNYLKKQADKPYEGVPIASAAVDLPLGSKLNATQV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCCCCCEE
KLATWPKDALPAGGYQDYKPLVGRIVVRPLSAGEVITENKLMPLNSSGGIMTYMVPDGHR
EEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEECCCEEEECCCCCEEEEEECCCCE
AVTVSVNEVAGVAGFITPNSRVDVLLTIPRPGSTNERDNISKIILQNVPVLATGQVTEQK
EEEEEHHHHCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHC
EGGKPGVVPTVTLDVTPIEAEKLIVGTKKGSLQLLLRNVIDVASVDTKGATVSRALGGTE
CCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
TLQRALVVRHAPARTKVAAAKPAATPAPAKFTMEVIKGGTKSVREFVQD
HHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA