| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118222
Identifier: 197118222
GI number: 197118222
Start: 2135247
End: 2135645
Strand: Reverse
Name: 197118222
Synonym: Gbem_1838
Alternate gene names: NA
Gene position: 2135645-2135247 (Counterclockwise)
Preceding gene: 197118223
Following gene: 197118221
Centisome position: 46.27
GC content: 50.38
Gene sequence:
>399_bases ATGAAGCAGAGCGACCAAAAAGGAACAGCGATGGTGGAACTGGCACTCCTACTCCCACTCTTGCTTCTTATAGTGTTCGG CATAACGGAATTCGGTAGGGCCTTCTATATAAAGAACGCTCTTACCAACGCTGCACGCGAGGGTGCCCGGAGAGCCTCTG TCACAACTACTGACCCTACTGTCGATCCCGCGCTGGCTACCTTGAAAGAGTACGTGAAGGGTGCGTGCGCCTTTCCTGTC AAGCCGGAAGCAATCCTCATCGAGTCTACATCTACGCCACCGCAGCATGGAGCGAGCAGCATAACGGTAACAGTGCCTTA CGATTTCCAATTTATGTATCCACTTACCTCGAAATTGAACATCACCTTAACCGGTCAAGCATCTATGTTCTATGAGTAA
Upstream 100 bases:
>100_bases TTACTCCTGCTGTTTAACAGGTAAGAGTCTACAGCTAAAAAGGGAGGAAAGGCGGCTACCGCTCTTTCCTCCCCAATTCA CAGATTCATAGAGGCGAACT
Downstream 100 bases:
>100_bases GGGATAACAGCAATAAATTCGGAGGGACCATGACCAGACCGAGTGCCATGACCACGGTAACCATAATTGCACTTCTGCTT GGTGGACTCGCAACCATTAT
Product: Flp pilus assembly TadE-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKQSDQKGTAMVELALLLPLLLLIVFGITEFGRAFYIKNALTNAAREGARRASVTTTDPTVDPALATLKEYVKGACAFPV KPEAILIESTSTPPQHGASSITVTVPYDFQFMYPLTSKLNITLTGQASMFYE
Sequences:
>Translated_132_residues MKQSDQKGTAMVELALLLPLLLLIVFGITEFGRAFYIKNALTNAAREGARRASVTTTDPTVDPALATLKEYVKGACAFPV KPEAILIESTSTPPQHGASSITVTVPYDFQFMYPLTSKLNITLTGQASMFYE >Mature_132_residues MKQSDQKGTAMVELALLLPLLLLIVFGITEFGRAFYIKNALTNAAREGARRASVTTTDPTVDPALATLKEYVKGACAFPV KPEAILIESTSTPPQHGASSITVTVPYDFQFMYPLTSKLNITLTGQASMFYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14334; Mature: 14334
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSDQKGTAMVELALLLPLLLLIVFGITEFGRAFYIKNALTNAAREGARRASVTTTDPT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VDPALATLKEYVKGACAFPVKPEAILIESTSTPPQHGASSITVTVPYDFQFMYPLTSKLN CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCEEE ITLTGQASMFYE EEEECCCCCCCC >Mature Secondary Structure MKQSDQKGTAMVELALLLPLLLLIVFGITEFGRAFYIKNALTNAAREGARRASVTTTDPT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VDPALATLKEYVKGACAFPVKPEAILIESTSTPPQHGASSITVTVPYDFQFMYPLTSKLN CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCEEE ITLTGQASMFYE EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA