| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118083
Identifier: 197118083
GI number: 197118083
Start: 1962172
End: 1962675
Strand: Direct
Name: 197118083
Synonym: Gbem_1697
Alternate gene names: NA
Gene position: 1962172-1962675 (Clockwise)
Preceding gene: 197118082
Following gene: 197118084
Centisome position: 42.52
GC content: 62.5
Gene sequence:
>504_bases ATGGACAGGAAAAAGTGTTGCGACAAGATGATGGGCGGCGGGGCTACCGACGGTTACGAGGTGGCGCGAATAGCCAAGGC ACCGGGAGGTTGCAGCTTGTGCGAGGACTTCGCCAAGAAAAATGAGGCGAAACCGGTGGCGGTAATGTGCTGCGAAGGGG CCTGCCTGAGAGGGGAGGTGGCGCGTCGGGCCGCGAACATCATCTGCCACGAGTTGGCGAAGGACAAGACAGTCAGGATC TGCCTGGGCGGAGCCTTCACGAAAGACACCGGCCAGCGCGGCCTGGTGCGTAACTCCGGCCGCCTGATAGCGCTTGAAGG GTGCGGCGTCAACTGCTCCTCCCGCATGATGCAAGGGGTGATCGAAGGGCTGACTCCCGAGCTGATCATTGCGGACCGCC TGTACGAGTTCGACCGGCAGCTGTTCGGAGTGGACGAGGCGACGTCGGAGGAGATAGGCGCCTGGGCCCGCACCGTCGCT GTCAAAATCGCCGCTACATTGTAG
Upstream 100 bases:
>100_bases TTTGATTTGAAAAAGTAGCCTGTCCCCTTTTTTGTATCCTTTTTCGTGGAAGCCCGTCTGTAGGGGGTGAAGCAGTCAAA TCTACAGACGGAGCGAAACC
Downstream 100 bases:
>100_bases GCGGAAAAAGGCACTCACCACAGAGGTCCACTGAGGAACCACAGAGGAAAAGCAAAAGCCTAAAGCCTTTGGGTTAAACC AAAAAGCTTTAGGCTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MDRKKCCDKMMGGGATDGYEVARIAKAPGGCSLCEDFAKKNEAKPVAVMCCEGACLRGEVARRAANIICHELAKDKTVRI CLGGAFTKDTGQRGLVRNSGRLIALEGCGVNCSSRMMQGVIEGLTPELIIADRLYEFDRQLFGVDEATSEEIGAWARTVA VKIAATL
Sequences:
>Translated_167_residues MDRKKCCDKMMGGGATDGYEVARIAKAPGGCSLCEDFAKKNEAKPVAVMCCEGACLRGEVARRAANIICHELAKDKTVRI CLGGAFTKDTGQRGLVRNSGRLIALEGCGVNCSSRMMQGVIEGLTPELIIADRLYEFDRQLFGVDEATSEEIGAWARTVA VKIAATL >Mature_167_residues MDRKKCCDKMMGGGATDGYEVARIAKAPGGCSLCEDFAKKNEAKPVAVMCCEGACLRGEVARRAANIICHELAKDKTVRI CLGGAFTKDTGQRGLVRNSGRLIALEGCGVNCSSRMMQGVIEGLTPELIIADRLYEFDRQLFGVDEATSEEIGAWARTVA VKIAATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17866; Mature: 17866
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKKCCDKMMGGGATDGYEVARIAKAPGGCSLCEDFAKKNEAKPVAVMCCEGACLRGEV CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHH ARRAANIICHELAKDKTVRICLGGAFTKDTGQRGLVRNSGRLIALEGCGVNCSSRMMQGV HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHH IEGLTPELIIADRLYEFDRQLFGVDEATSEEIGAWARTVAVKIAATL HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MDRKKCCDKMMGGGATDGYEVARIAKAPGGCSLCEDFAKKNEAKPVAVMCCEGACLRGEV CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHH ARRAANIICHELAKDKTVRICLGGAFTKDTGQRGLVRNSGRLIALEGCGVNCSSRMMQGV HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHH IEGLTPELIIADRLYEFDRQLFGVDEATSEEIGAWARTVAVKIAATL HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA