| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is phnA [H]
Identifier: 197118084
GI number: 197118084
Start: 1962959
End: 1963297
Strand: Direct
Name: phnA [H]
Synonym: Gbem_1698
Alternate gene names: 197118084
Gene position: 1962959-1963297 (Clockwise)
Preceding gene: 197118083
Following gene: 197118085
Centisome position: 42.53
GC content: 58.11
Gene sequence:
>339_bases ATGTCTAGCCTGCCGCAATGCCCTTCCTGCAAGTCCGAATACACCTACGAGGACGGGAGCCTGTATGTCTGTCCCGAGTG CGGCAATGAGTGGCCGCAAGCCGCCGCTGAGAGTGAAGCATCCGACAGCGTCGTGCGCGATGCCTTCGGCAATGTCCTCA ACGACGGCGATTCCGTCACCGTCATCAAGGATCTTAAGATTAAAGGCTCGTCCTCGGTAGTGAAGGTCGGCACCAAGGTG AGGAACATCCGCATCGTCTCGGGGGACCACGACATCGACTGCAAGATCGACGGCATCGGCGCGATGCAGCTCAAATCTGA GTTCGTGAAGAAGGCCTGA
Upstream 100 bases:
>100_bases GTGAAAGCCTTTGCTTCTCCGTTTTGGGGTTTGCAAAAAGGGCGTCTGGGTTATATATTGCTGCGCGCATGTAAAACCTA TGAAAGAAAGAGGAATACCA
Downstream 100 bases:
>100_bases TTGTAAAGTAGAGCGAAGATTTTGGAGGAGCAGCATATGCGAGTCCTGTTGATTTCCGCGAATACTGAAACCATGAACAT GGTGCCGCTCCCGTTGGGGC
Product: phosphonoacetate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSSLPQCPSCKSEYTYEDGSLYVCPECGNEWPQAAAESEASDSVVRDAFGNVLNDGDSVTVIKDLKIKGSSSVVKVGTKV RNIRIVSGDHDIDCKIDGIGAMQLKSEFVKKA
Sequences:
>Translated_112_residues MSSLPQCPSCKSEYTYEDGSLYVCPECGNEWPQAAAESEASDSVVRDAFGNVLNDGDSVTVIKDLKIKGSSSVVKVGTKV RNIRIVSGDHDIDCKIDGIGAMQLKSEFVKKA >Mature_111_residues SSLPQCPSCKSEYTYEDGSLYVCPECGNEWPQAAAESEASDSVVRDAFGNVLNDGDSVTVIKDLKIKGSSSVVKVGTKVR NIRIVSGDHDIDCKIDGIGAMQLKSEFVKKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=109, Percent_Identity=66.9724770642202, Blast_Score=163, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 12019; Mature: 11887
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPQCPSCKSEYTYEDGSLYVCPECGNEWPQAAAESEASDSVVRDAFGNVLNDGDSVT CCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEE VIKDLKIKGSSSVVKVGTKVRNIRIVSGDHDIDCKIDGIGAMQLKSEFVKKA EEEEEEECCCCCEEEECCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure SSLPQCPSCKSEYTYEDGSLYVCPECGNEWPQAAAESEASDSVVRDAFGNVLNDGDSVT CCCCCCCCCCCCCEECCCCEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEE VIKDLKIKGSSSVVKVGTKVRNIRIVSGDHDIDCKIDGIGAMQLKSEFVKKA EEEEEEECCCCCEEEECCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]