| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197118049
GI number: 197118049
Start: 1928127
End: 1929317
Strand: Direct
Name: zraS [H]
Synonym: Gbem_1662
Alternate gene names: 197118049
Gene position: 1928127-1929317 (Clockwise)
Preceding gene: 197118048
Following gene: 197118050
Centisome position: 41.78
GC content: 61.21
Gene sequence:
>1191_bases ATGTCCCAACAGGATAAAGAGCCGCGCGGCCGCGTGCTGATAGTCGACGACGAGAAGGTCATCCTCGACCTTACCGCCAT CATCCTCAAAAACCGCGGCTACCAGGTCTTCACCGCACTTTCGGCGCTGGAGGGGCTGGAGGTCATCGAGAAGGAACGCC CCGAGCTCGTGCTTCTCGATTACATGATGCCGAACATGGACGGCCTCACCGCGCTCAAGGAGATCAGGCGCAGCTACCCC GATACCTACGTGATCATGTTCACCGGCAAGGGGAGCGAGGAGATCGCCGTCGAGCTGATGAAGGCGGGGGCCTCCGACTA CATACTGAAGCCGTTCAACAACCAGGACCTGGTCGAGAGGATCGAGAGCGTCCTGAAGCTGCGGGGGATCGAGCTGCAAA ACCGCGCCCTTTTGAGCGAGCGGGAAAGGCTTCTGGCCGAGATCGCGGACTGGAACCGCGAGCTGGAGCGCCGGGTGCAG GAAAAGAGCGAGGCGCTGCGCCGGGCCCAGGCAGAAGTGGTGCAGTCCGAGAAGCTCGCTTCCCTTGGCTACCTCTCCGC CGGGATGGCGCACGAGATCAGGAACCCCTTGAACTCCATAGCGCTTTTCGTGCAGCTGATCAAAACCGGGCTGGACGAGC ACGAGCGCCTGGATTACGTGGAAAAGATCCTCAAAGAAGTCGACCGGATCGACAACATCCTGGCCAAGCTACTCGACGCC TCCAAGCGGCCGAAGTTCGAGATCAGCGAGGTGAGGGTGGACCGGGTCCTGGAGCACACGCTCGACGCCTTCACCCCGCA GCTGCGGCAGAAAAGGATCCGGGCGGTCACCGATTTCAAGAGCATCCCGCCTGCCATCAAGGCGGACCCGATGGAGATAG AGCAGATCTTCACCAACCTCTTTTTGAACTCCATCTACGTGATGCCTGAGGAGGGGACCCTCGCGGTGGAGCTGGAAGGG GACGAGCAGTGGATCACTGTGAGGGTCTCCGATACCGGCCCCGGCATCCCGCCTGAAAACCTCCCCAACATCTTCGACCC CTTCTTCACCACCAACAGCCGCGGCACCGGGCTTGGGCTCTCGGTGGTCCTGCGCATCGTGAAGACCTACAAGGGGAAGA TCGAAGTGGAGAAAAGCGACAGCTTAGGGACCACCTTTCTGGTCCGTCTGCCGCTTGCCCCCCCGAGGTAG
Upstream 100 bases:
>100_bases GGCTCGCCTGACTCCGGCGCCATAAGACTTCTGCGGGGCAGCGTTTTGCTGCCCCTTTTTTTTGATGCACCAAAATCACT ACAGAACAGGAAAACCCGTC
Downstream 100 bases:
>100_bases CGGGGGAGGATTCTCCCTTCCCTTTTGCAATACATTTTTGTATGATGGCGCATTCCATCGCGCTTTGAGGTTGAAATGAC AGCAGAAAACCGGAAAAAGA
Product: response receiver histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSQQDKEPRGRVLIVDDEKVILDLTAIILKNRGYQVFTALSALEGLEVIEKERPELVLLDYMMPNMDGLTALKEIRRSYP DTYVIMFTGKGSEEIAVELMKAGASDYILKPFNNQDLVERIESVLKLRGIELQNRALLSERERLLAEIADWNRELERRVQ EKSEALRRAQAEVVQSEKLASLGYLSAGMAHEIRNPLNSIALFVQLIKTGLDEHERLDYVEKILKEVDRIDNILAKLLDA SKRPKFEISEVRVDRVLEHTLDAFTPQLRQKRIRAVTDFKSIPPAIKADPMEIEQIFTNLFLNSIYVMPEEGTLAVELEG DEQWITVRVSDTGPGIPPENLPNIFDPFFTTNSRGTGLGLSVVLRIVKTYKGKIEVEKSDSLGTTFLVRLPLAPPR
Sequences:
>Translated_396_residues MSQQDKEPRGRVLIVDDEKVILDLTAIILKNRGYQVFTALSALEGLEVIEKERPELVLLDYMMPNMDGLTALKEIRRSYP DTYVIMFTGKGSEEIAVELMKAGASDYILKPFNNQDLVERIESVLKLRGIELQNRALLSERERLLAEIADWNRELERRVQ EKSEALRRAQAEVVQSEKLASLGYLSAGMAHEIRNPLNSIALFVQLIKTGLDEHERLDYVEKILKEVDRIDNILAKLLDA SKRPKFEISEVRVDRVLEHTLDAFTPQLRQKRIRAVTDFKSIPPAIKADPMEIEQIFTNLFLNSIYVMPEEGTLAVELEG DEQWITVRVSDTGPGIPPENLPNIFDPFFTTNSRGTGLGLSVVLRIVKTYKGKIEVEKSDSLGTTFLVRLPLAPPR >Mature_395_residues SQQDKEPRGRVLIVDDEKVILDLTAIILKNRGYQVFTALSALEGLEVIEKERPELVLLDYMMPNMDGLTALKEIRRSYPD TYVIMFTGKGSEEIAVELMKAGASDYILKPFNNQDLVERIESVLKLRGIELQNRALLSERERLLAEIADWNRELERRVQE KSEALRRAQAEVVQSEKLASLGYLSAGMAHEIRNPLNSIALFVQLIKTGLDEHERLDYVEKILKEVDRIDNILAKLLDAS KRPKFEISEVRVDRVLEHTLDAFTPQLRQKRIRAVTDFKSIPPAIKADPMEIEQIFTNLFLNSIYVMPEEGTLAVELEGD EQWITVRVSDTGPGIPPENLPNIFDPFFTTNSRGTGLGLSVVLRIVKTYKGKIEVEKSDSLGTTFLVRLPLAPPR
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=33.920704845815, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788549, Length=231, Percent_Identity=31.1688311688312, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=32.089552238806, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI145693157, Length=254, Percent_Identity=28.3464566929134, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790300, Length=237, Percent_Identity=29.535864978903, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1790346, Length=223, Percent_Identity=27.3542600896861, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788550, Length=127, Percent_Identity=34.6456692913386, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786599, Length=145, Percent_Identity=32.4137931034483, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790861, Length=210, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789149, Length=246, Percent_Identity=29.6747967479675, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788713, Length=248, Percent_Identity=24.1935483870968, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=36.8421052631579, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789809, Length=122, Percent_Identity=34.4262295081967, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786783, Length=220, Percent_Identity=25.9090909090909, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=34.4827586206897, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789808, Length=219, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790299, Length=118, Percent_Identity=33.8983050847458, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=35.042735042735, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082128, Length=215, Percent_Identity=23.2558139534884, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787375, Length=116, Percent_Identity=26.7241379310345, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI2367329, Length=116, Percent_Identity=37.0689655172414, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994928, Length=211, Percent_Identity=27.0142180094787, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786911, Length=115, Percent_Identity=31.304347826087, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788393, Length=218, Percent_Identity=25.6880733944954, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322000, Length=107, Percent_Identity=33.6448598130841, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 44982; Mature: 44850
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQDKEPRGRVLIVDDEKVILDLTAIILKNRGYQVFTALSALEGLEVIEKERPELVLLD CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE YMMPNMDGLTALKEIRRSYPDTYVIMFTGKGSEEIAVELMKAGASDYILKPFNNQDLVER CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCEECCCCCHHHHHH IESVLKLRGIELQNRALLSERERLLAEIADWNRELERRVQEKSEALRRAQAEVVQSEKLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGYLSAGMAHEIRNPLNSIALFVQLIKTGLDEHERLDYVEKILKEVDRIDNILAKLLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKRPKFEISEVRVDRVLEHTLDAFTPQLRQKRIRAVTDFKSIPPAIKADPMEIEQIFTNL CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FLNSIYVMPEEGTLAVELEGDEQWITVRVSDTGPGIPPENLPNIFDPFFTTNSRGTGLGL HHHHEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHH SVVLRIVKTYKGKIEVEKSDSLGTTFLVRLPLAPPR HHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure SQQDKEPRGRVLIVDDEKVILDLTAIILKNRGYQVFTALSALEGLEVIEKERPELVLLD CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE YMMPNMDGLTALKEIRRSYPDTYVIMFTGKGSEEIAVELMKAGASDYILKPFNNQDLVER CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCEECCCCCHHHHHH IESVLKLRGIELQNRALLSERERLLAEIADWNRELERRVQEKSEALRRAQAEVVQSEKLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGYLSAGMAHEIRNPLNSIALFVQLIKTGLDEHERLDYVEKILKEVDRIDNILAKLLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKRPKFEISEVRVDRVLEHTLDAFTPQLRQKRIRAVTDFKSIPPAIKADPMEIEQIFTNL CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FLNSIYVMPEEGTLAVELEGDEQWITVRVSDTGPGIPPENLPNIFDPFFTTNSRGTGLGL HHHHEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHH SVVLRIVKTYKGKIEVEKSDSLGTTFLVRLPLAPPR HHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]