Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118023

Identifier: 197118023

GI number: 197118023

Start: 1900731

End: 1902143

Strand: Direct

Name: 197118023

Synonym: Gbem_1636

Alternate gene names: NA

Gene position: 1900731-1902143 (Clockwise)

Preceding gene: 197118022

Following gene: 197118024

Centisome position: 41.18

GC content: 55.77

Gene sequence:

>1413_bases
TTGAGAGCTACTGTTTTGATGTCACTGTTTTTCTTGCTTCTGCTATCTAAAGTGGCCTTGGCAGACAGTTATCTTCCTTT
GGACAGTCGGCTGTATGGGGACCTGAGGTTTCTTGAAGCAAACGGTGGGATAACCACCGCGCAGTTGTCCACCCTTCCGA
TCTCGCGCAGGGAGGCGGCCCGGCTGACATCGGAGGCAATCCACAACGTAGCGGCTGACGACTCTTTTCGCGTGCAGGCA
GCCCTCGCCCGGCTGAAAAGGGAATTCCGCAGGGAACTGGAGGGTGATACCTCTCCAGAGTTCGTCATGGATACCGTGGA
TCTGCAGTATATGTACAGTGACGATAAAGGCTTCTTCTGGCAGAAAAACAGGGACGGCGTCGAGGTCAGAGGGGGACACA
ACCTTTTCCTGAACGCGACCGGTCGTTTCGACAGCAAATACGTAGGCGCAGTGGTCAGGCCCGAGGCGGATCTGTACGAG
GCTGATGCCGGGCTTCGGCTGAAAAAGGCCTACCTCCTTGCCAATCTCGGCCGCGAGGAATTCGTGCTGGGGAAAGAAAG
CCAGTGGTGGGGTACCGGCATTAACGGTTCGCCGTTGTTGTCGAACAACGCTGACCCGCTGACCATCTTCAAGATCTCCA
ACAGTGTTCCCTATTTTCCCTTCGGTATCGGCGTCCGCGGCAGCTTCTTTATCTCCAGGCTGGAGGAGGAGCGAACGGAT
GTAGACCGGCCGATACTGTACGGCCTCCGACTGGACCTGAAGCCTTTTCCCTGGTTGGAACTGGGGTTGGCGAAGACGGC
GCTTTTAGGGGGGGAAGGGCGCAATGCCGGTATACGCACCTTCGGCAACAGCTTGTTGGGGCGGGGAGAAAATGAAGAGG
GTGAGGCCGGCGATCAAAGAGCCGGCCTGGATGCCAAGGTGGTAATACCGTGGCGAGTGCAGCCGATAACGCTTTCTGTC
GAGATGACAGGCGAGGATCAACGCAACAACTTTCCGGAGAAGTGGTTCGGCGTCTACGGTATCTATCTTCCCCGGGTTCT
GAGTCTGGAGAGGCTCGAAGTCAGCGCCGAATATGCGGACAACGTGGACGCCACCTACAAAGGGTTCTGGTACACCCATC
ACATCTATTCCCAAGGGTATACCTATCACGGCAGGATTATCGGTCACTACATCGGAGGCGACGCAAGGGACCTCTTCCTG
CGGGGGCAATATCACTTTGACCCCCTGATTCTGTCTCTGTCGTATGAAAATCTTCGCAAGGGGTATCCGGAGAGGTTTCG
ATGGGAAAGCTTTGAAGCCTCCGCTCTCACCGAACTCTCCAACCAGACCGACCTTACGATTTCCGCAGGCTATGCCAGGG
AGGCGGAGAAGAATTTCATCATGCGGATAGGGCTGAGGCATTACTTCATGTGA

Upstream 100 bases:

>100_bases
AAACTCTTTTAAATTGAACCATTCTGTTTGCCATCACTGTATTTGTTTGCTACATATAAATAATATTGTCTAATTTGTGC
CTATTAAAAGGAGAGGGCCG

Downstream 100 bases:

>100_bases
GGACAGCCGCAAAGACGCTAAGAAAAACCAAAGCTGCAAAAGCTTCTCACGCAAAGCCGCAAAGACGCGGAGAAAGCCAA
AAGGTCTCTCCTTTGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MRATVLMSLFFLLLLSKVALADSYLPLDSRLYGDLRFLEANGGITTAQLSTLPISRREAARLTSEAIHNVAADDSFRVQA
ALARLKREFRRELEGDTSPEFVMDTVDLQYMYSDDKGFFWQKNRDGVEVRGGHNLFLNATGRFDSKYVGAVVRPEADLYE
ADAGLRLKKAYLLANLGREEFVLGKESQWWGTGINGSPLLSNNADPLTIFKISNSVPYFPFGIGVRGSFFISRLEEERTD
VDRPILYGLRLDLKPFPWLELGLAKTALLGGEGRNAGIRTFGNSLLGRGENEEGEAGDQRAGLDAKVVIPWRVQPITLSV
EMTGEDQRNNFPEKWFGVYGIYLPRVLSLERLEVSAEYADNVDATYKGFWYTHHIYSQGYTYHGRIIGHYIGGDARDLFL
RGQYHFDPLILSLSYENLRKGYPERFRWESFEASALTELSNQTDLTISAGYAREAEKNFIMRIGLRHYFM

Sequences:

>Translated_470_residues
MRATVLMSLFFLLLLSKVALADSYLPLDSRLYGDLRFLEANGGITTAQLSTLPISRREAARLTSEAIHNVAADDSFRVQA
ALARLKREFRRELEGDTSPEFVMDTVDLQYMYSDDKGFFWQKNRDGVEVRGGHNLFLNATGRFDSKYVGAVVRPEADLYE
ADAGLRLKKAYLLANLGREEFVLGKESQWWGTGINGSPLLSNNADPLTIFKISNSVPYFPFGIGVRGSFFISRLEEERTD
VDRPILYGLRLDLKPFPWLELGLAKTALLGGEGRNAGIRTFGNSLLGRGENEEGEAGDQRAGLDAKVVIPWRVQPITLSV
EMTGEDQRNNFPEKWFGVYGIYLPRVLSLERLEVSAEYADNVDATYKGFWYTHHIYSQGYTYHGRIIGHYIGGDARDLFL
RGQYHFDPLILSLSYENLRKGYPERFRWESFEASALTELSNQTDLTISAGYAREAEKNFIMRIGLRHYFM
>Mature_470_residues
MRATVLMSLFFLLLLSKVALADSYLPLDSRLYGDLRFLEANGGITTAQLSTLPISRREAARLTSEAIHNVAADDSFRVQA
ALARLKREFRRELEGDTSPEFVMDTVDLQYMYSDDKGFFWQKNRDGVEVRGGHNLFLNATGRFDSKYVGAVVRPEADLYE
ADAGLRLKKAYLLANLGREEFVLGKESQWWGTGINGSPLLSNNADPLTIFKISNSVPYFPFGIGVRGSFFISRLEEERTD
VDRPILYGLRLDLKPFPWLELGLAKTALLGGEGRNAGIRTFGNSLLGRGENEEGEAGDQRAGLDAKVVIPWRVQPITLSV
EMTGEDQRNNFPEKWFGVYGIYLPRVLSLERLEVSAEYADNVDATYKGFWYTHHIYSQGYTYHGRIIGHYIGGDARDLFL
RGQYHFDPLILSLSYENLRKGYPERFRWESFEASALTELSNQTDLTISAGYAREAEKNFIMRIGLRHYFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53298; Mature: 53298

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATVLMSLFFLLLLSKVALADSYLPLDSRLYGDLRFLEANGGITTAQLSTLPISRREAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCEEEEECCCCEEEEEEEECCCCHHHHH
RLTSEAIHNVAADDSFRVQAALARLKREFRRELEGDTSPEFVMDTVDLQYMYSDDKGFFW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEE
QKNRDGVEVRGGHNLFLNATGRFDSKYVGAVVRPEADLYEADAGLRLKKAYLLANLGREE
ECCCCCEEEECCCEEEEEECCCCCCCEECEEECCCCCCEECCCCCEEHHHHHHHHCCCHH
FVLGKESQWWGTGINGSPLLSNNADPLTIFKISNSVPYFPFGIGVRGSFFISRLEEERTD
EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHCC
VDRPILYGLRLDLKPFPWLELGLAKTALLGGEGRNAGIRTFGNSLLGRGENEEGEAGDQR
CCCCEEEEEEECCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
AGLDAKVVIPWRVQPITLSVEMTGEDQRNNFPEKWFGVYGIYLPRVLSLERLEVSAEYAD
CCCCEEEEEEEEEEEEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHCC
NVDATYKGFWYTHHIYSQGYTYHGRIIGHYIGGDARDLFLRGQYHFDPLILSLSYENLRK
CCCCEEEEEEEEEEEECCCEEEECEEEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHHC
GYPERFRWESFEASALTELSNQTDLTISAGYAREAEKNFIMRIGLRHYFM
CCCCHHCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHEEEECHHHHCC
>Mature Secondary Structure
MRATVLMSLFFLLLLSKVALADSYLPLDSRLYGDLRFLEANGGITTAQLSTLPISRREAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCEEEEECCCCEEEEEEEECCCCHHHHH
RLTSEAIHNVAADDSFRVQAALARLKREFRRELEGDTSPEFVMDTVDLQYMYSDDKGFFW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEE
QKNRDGVEVRGGHNLFLNATGRFDSKYVGAVVRPEADLYEADAGLRLKKAYLLANLGREE
ECCCCCEEEECCCEEEEEECCCCCCCEECEEECCCCCCEECCCCCEEHHHHHHHHCCCHH
FVLGKESQWWGTGINGSPLLSNNADPLTIFKISNSVPYFPFGIGVRGSFFISRLEEERTD
EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHCC
VDRPILYGLRLDLKPFPWLELGLAKTALLGGEGRNAGIRTFGNSLLGRGENEEGEAGDQR
CCCCEEEEEEECCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
AGLDAKVVIPWRVQPITLSVEMTGEDQRNNFPEKWFGVYGIYLPRVLSLERLEVSAEYAD
CCCCEEEEEEEEEEEEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHCC
NVDATYKGFWYTHHIYSQGYTYHGRIIGHYIGGDARDLFLRGQYHFDPLILSLSYENLRK
CCCCEEEEEEEEEEEECCCEEEECEEEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHHC
GYPERFRWESFEASALTELSNQTDLTISAGYAREAEKNFIMRIGLRHYFM
CCCCHHCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]