Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118022

Identifier: 197118022

GI number: 197118022

Start: 1898813

End: 1900444

Strand: Direct

Name: 197118022

Synonym: Gbem_1635

Alternate gene names: NA

Gene position: 1898813-1900444 (Clockwise)

Preceding gene: 197118021

Following gene: 197118023

Centisome position: 41.14

GC content: 60.36

Gene sequence:

>1632_bases
ATGAGATTTTTCCTGGTAGCACTCGTCGTTGGTATCACTAGCTTCGCTTCTTCAGCTTTTGCCCTTTCTTCCGCCAACAT
CCCTCTCGACAGCCCCATCTATCTATACCTGGAAAAGCTCTCGGGCTATGGCCTCGTCTCTGGCGATGTGAAGGGGATCC
GTCCTTTCTCGAAGGCCGAGGCGGTGCGGCTCCTGCGTGAGGCGGAAACGCGCCTTGCCTCCGGCGACCCCCCCCCGCTT
GCGGATGAGATGGTCCAGCGGCTGAGGGAGCTTTTGCCACGCGAGGCGGCCCTTTATGCCGACGAGGGAAAGGCAAAAAC
CCTGGATTTCGAGCCGGTTGCTGCCGCGCGCCTTCGCTACGTGTATTTGGATGGTAAGCCGCGCAGCTACTTCCGCGCGG
TGCAAGATGGGGGCAACGAAGGCGTCTTCGGCATCGGCAGCGGCCTCAGGCCGGCGACCCCTTACCCCAATCCCGTTCAG
CAGCGCGGCTTCGAGGGGACACCGCTTTTTGAAAACAACGACGGCGTGGTCTACCACTCCGGCTCCAACCTCGACCTGCG
CGGTAGCGGCGAGGCTTACTGGGGGGCAAAGGCGGCCTTGCTTGTTGAGCCGATGCTGCTTTGGTCGGAAAAGACCGACG
AGGCGACGCTGCGCCTGAACCGGGGTTACATAAAGTTCGGCGGCAAGGGTCTGGAGCTGGAGGCGGGGCGTGACGAGAAC
TGGCTGGGACCCGGCTACCGCGGCGCCATCACGCTTACCAACAACGCGCGCAACATGGACCTGGTGAAACTGTCGAGCCC
GGAGCTTGTTTCCACCAAATATCTTTGGGACCTGAAATATACACTTATCTTTTCTCAGCTGGAAAAAACGGTGACTGACG
GTCAGGAAAGAGAGCCCTGGTTTTTTGCCGGGAAGCTCTCGATGAAACCGACGCAGAATATAGAATTCGGCATCAACCTC
GGACGGCAACTCGGCGGGCCGGGCGTTAGCAACAGTCTCGGTGACAACGCTCGCGGGCTGATCGGCGGCTGGAACCATGA
CAATTCCAACACATTGGCCGGTGTCGATCTTCGCTTCAGGCTCCCCTGGCTCAGAAACAGCGAACTGTACGGAGAGTTTT
CCGGCGAGGATGCCGCCGCGTTCTGGCCCATCGTCGAGAGCTACGTGGCCGGCTTCTTTATCCCGACACTGACCGAGAGC
GGCCGGGACGACCTCCGCTTCGAATACTTCCGTGGCAACGAGATCCTCTACACCAACGGGACTTTCCCGGAGGGGTACCT
GTCTCACGGGCTCCCGATCGGGCATTCCCAGGGGGGGGCGGCCGAGGAGTGGTTCCTGCGCTACAGCCACTGGTTTTCCG
TGCGTAACAACCTGGCTCTTGAGGGAATGCACAGCACCCGCGGGGACTATGGGCGGATGACGGTCGACGCAATGGGCAAA
TTCGACGCCGCCGGAGTCATGCAGGCTGTTGAGCGCAGGAACGCACTGCGCGCCTTCTGGAGTTTCCCGGTCCAGGGGGA
ATGGAATGCCCTCCTGATGTACGGGCACGAGTGGATCGATAACCTTGAGCTGAGGCAGGGGGAGAGCCGCAAGAACCAGC
TCTTAAGGGCTGAACTGACCTACCGATATTAA

Upstream 100 bases:

>100_bases
AAGACGGGATCACCAGGGTTGTTAACGATCTGTGATAGTGACTTCTTTTTTTGCGGGTACCCTTTGCGCCTTTGCGGCTT
TGCGTGAGAGAATGTAATTT

Downstream 100 bases:

>100_bases
GATTAAGATTGAGATTGAGATCTGTTGTTGCTGGGCCGGCTCCACCGATGTGGCGCCGGCTTTTTTTTGCCAGTTGTCGC
CTTTCTCACGAACAAGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MRFFLVALVVGITSFASSAFALSSANIPLDSPIYLYLEKLSGYGLVSGDVKGIRPFSKAEAVRLLREAETRLASGDPPPL
ADEMVQRLRELLPREAALYADEGKAKTLDFEPVAAARLRYVYLDGKPRSYFRAVQDGGNEGVFGIGSGLRPATPYPNPVQ
QRGFEGTPLFENNDGVVYHSGSNLDLRGSGEAYWGAKAALLVEPMLLWSEKTDEATLRLNRGYIKFGGKGLELEAGRDEN
WLGPGYRGAITLTNNARNMDLVKLSSPELVSTKYLWDLKYTLIFSQLEKTVTDGQEREPWFFAGKLSMKPTQNIEFGINL
GRQLGGPGVSNSLGDNARGLIGGWNHDNSNTLAGVDLRFRLPWLRNSELYGEFSGEDAAAFWPIVESYVAGFFIPTLTES
GRDDLRFEYFRGNEILYTNGTFPEGYLSHGLPIGHSQGGAAEEWFLRYSHWFSVRNNLALEGMHSTRGDYGRMTVDAMGK
FDAAGVMQAVERRNALRAFWSFPVQGEWNALLMYGHEWIDNLELRQGESRKNQLLRAELTYRY

Sequences:

>Translated_543_residues
MRFFLVALVVGITSFASSAFALSSANIPLDSPIYLYLEKLSGYGLVSGDVKGIRPFSKAEAVRLLREAETRLASGDPPPL
ADEMVQRLRELLPREAALYADEGKAKTLDFEPVAAARLRYVYLDGKPRSYFRAVQDGGNEGVFGIGSGLRPATPYPNPVQ
QRGFEGTPLFENNDGVVYHSGSNLDLRGSGEAYWGAKAALLVEPMLLWSEKTDEATLRLNRGYIKFGGKGLELEAGRDEN
WLGPGYRGAITLTNNARNMDLVKLSSPELVSTKYLWDLKYTLIFSQLEKTVTDGQEREPWFFAGKLSMKPTQNIEFGINL
GRQLGGPGVSNSLGDNARGLIGGWNHDNSNTLAGVDLRFRLPWLRNSELYGEFSGEDAAAFWPIVESYVAGFFIPTLTES
GRDDLRFEYFRGNEILYTNGTFPEGYLSHGLPIGHSQGGAAEEWFLRYSHWFSVRNNLALEGMHSTRGDYGRMTVDAMGK
FDAAGVMQAVERRNALRAFWSFPVQGEWNALLMYGHEWIDNLELRQGESRKNQLLRAELTYRY
>Mature_543_residues
MRFFLVALVVGITSFASSAFALSSANIPLDSPIYLYLEKLSGYGLVSGDVKGIRPFSKAEAVRLLREAETRLASGDPPPL
ADEMVQRLRELLPREAALYADEGKAKTLDFEPVAAARLRYVYLDGKPRSYFRAVQDGGNEGVFGIGSGLRPATPYPNPVQ
QRGFEGTPLFENNDGVVYHSGSNLDLRGSGEAYWGAKAALLVEPMLLWSEKTDEATLRLNRGYIKFGGKGLELEAGRDEN
WLGPGYRGAITLTNNARNMDLVKLSSPELVSTKYLWDLKYTLIFSQLEKTVTDGQEREPWFFAGKLSMKPTQNIEFGINL
GRQLGGPGVSNSLGDNARGLIGGWNHDNSNTLAGVDLRFRLPWLRNSELYGEFSGEDAAAFWPIVESYVAGFFIPTLTES
GRDDLRFEYFRGNEILYTNGTFPEGYLSHGLPIGHSQGGAAEEWFLRYSHWFSVRNNLALEGMHSTRGDYGRMTVDAMGK
FDAAGVMQAVERRNALRAFWSFPVQGEWNALLMYGHEWIDNLELRQGESRKNQLLRAELTYRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60595; Mature: 60595

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFLVALVVGITSFASSAFALSSANIPLDSPIYLYLEKLSGYGLVSGDVKGIRPFSKAE
CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHCCCEEEECCCCCCCCCHHHH
AVRLLREAETRLASGDPPPLADEMVQRLRELLPREAALYADEGKAKTLDFEPVAAARLRY
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEEEE
VYLDGKPRSYFRAVQDGGNEGVFGIGSGLRPATPYPNPVQQRGFEGTPLFENNDGVVYHS
EEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCEECCCCEEEEC
GSNLDLRGSGEAYWGAKAALLVEPMLLWSEKTDEATLRLNRGYIKFGGKGLELEAGRDEN
CCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEEECCCEEEEECCCCCC
WLGPGYRGAITLTNNARNMDLVKLSSPELVSTKYLWDLKYTLIFSQLEKTVTDGQEREPW
CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCE
FFAGKLSMKPTQNIEFGINLGRQLGGPGVSNSLGDNARGLIGGWNHDNSNTLAGVDLRFR
EEEEEEECCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEE
LPWLRNSELYGEFSGEDAAAFWPIVESYVAGFFIPTLTESGRDDLRFEYFRGNEILYTNG
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECC
TFPEGYLSHGLPIGHSQGGAAEEWFLRYSHWFSVRNNLALEGMHSTRGDYGRMTVDAMGK
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEHHHCCC
FDAAGVMQAVERRNALRAFWSFPVQGEWNALLMYGHEWIDNLELRQGESRKNQLLRAELT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCHHCCCCCHHHHEEEEEEE
YRY
ECC
>Mature Secondary Structure
MRFFLVALVVGITSFASSAFALSSANIPLDSPIYLYLEKLSGYGLVSGDVKGIRPFSKAE
CHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHCCCEEEECCCCCCCCCHHHH
AVRLLREAETRLASGDPPPLADEMVQRLRELLPREAALYADEGKAKTLDFEPVAAARLRY
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEEEE
VYLDGKPRSYFRAVQDGGNEGVFGIGSGLRPATPYPNPVQQRGFEGTPLFENNDGVVYHS
EEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCEECCCCEEEEC
GSNLDLRGSGEAYWGAKAALLVEPMLLWSEKTDEATLRLNRGYIKFGGKGLELEAGRDEN
CCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEEECCCEEEEECCCCCC
WLGPGYRGAITLTNNARNMDLVKLSSPELVSTKYLWDLKYTLIFSQLEKTVTDGQEREPW
CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCE
FFAGKLSMKPTQNIEFGINLGRQLGGPGVSNSLGDNARGLIGGWNHDNSNTLAGVDLRFR
EEEEEEECCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEE
LPWLRNSELYGEFSGEDAAAFWPIVESYVAGFFIPTLTESGRDDLRFEYFRGNEILYTNG
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECC
TFPEGYLSHGLPIGHSQGGAAEEWFLRYSHWFSVRNNLALEGMHSTRGDYGRMTVDAMGK
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEHHHCCC
FDAAGVMQAVERRNALRAFWSFPVQGEWNALLMYGHEWIDNLELRQGESRKNQLLRAELT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCHHCCCCCHHHHEEEEEEE
YRY
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA