| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118019
Identifier: 197118019
GI number: 197118019
Start: 1895107
End: 1895781
Strand: Reverse
Name: 197118019
Synonym: Gbem_1632
Alternate gene names: NA
Gene position: 1895781-1895107 (Counterclockwise)
Preceding gene: 197118030
Following gene: 308535255
Centisome position: 41.08
GC content: 54.67
Gene sequence:
>675_bases ATGACACTACCGGAACTACTGGAACTCAACTTCAACGGCCACAGCATCAACGACTTCATCGCGGAAGTAAACACCATAGC CGACAAAACGGAGAAGCACCCGGCCCTTAAGGACTTTCCCGAATACTTCACCCCACCGGAGAAGCTCAGGGAAAAAGCGG TGCTACTGGTGCAACTTCGCGATGCCTCCGCCAGCGGCGACAGGGATAAGAAGGCGGAGAAAATGGCCGCCTGGGAAGAC ACCAAACTTGCCGTGATCATGAACGGTAAGCACATCACCATGCTGTCGTTGCACCGCAACGACCCCAGCATCCTGCTTAA CACGGGCTACAAGTTGAAACAGAAGCACATTGCTAAACCCACCTCCTCCTCTTCCACGGACCTGCTGGCGGAGACGCCGG GCCTCGAGTTGAGGTACATGCAATCGGGTTCGGGGCCAATAGTGGGTGCCTTCACCGTCATCATAACCAAGGCTAAGAAC AGGGCGTCCACAGAGCTGCAGATGTCTGACAACCCTTCTGACGAATCTTCCTGGAATAGCCAAGGGATCTATGCCAAATC GCGCATAGAGTACAAAGGGCAACCATCGGAAAAACGTGTCTACTTCAGGGCCAGGTACCACCAGGACGGCGGCGTCAGTC CATGGTCCCCGGTTGTAAACATCCTCGTTCTGTAA
Upstream 100 bases:
>100_bases CGTGAGAAAATTTTAAAAAAAATTACCATGGCCGCTGTACACGTCGTTAACCGGTGCTAAGATTCCACCCGCTACGGAAA TCGCGTAAAGGAGGTTTCGA
Downstream 100 bases:
>100_bases AAAGTCCGCCTCTTTAACAAGATGAAACGACGACGCGGCTGCATCTTACAATCCAGCCGCGTTTTCTTTTGCCCCGGCTT TAGCCTTCCGCCTTGCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWED TKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKN RASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL
Sequences:
>Translated_224_residues MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWED TKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKN RASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL >Mature_223_residues TLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWEDT KLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNR ASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25029; Mature: 24898
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLR CCCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCEEEEEEEE DASASGDRDKKAEKMAAWEDTKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKP CCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCCEEHHHHCCCC TSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNRASTELQMSDNPSDESSWNS CCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCC QGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL CCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEC >Mature Secondary Structure TLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLR CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCEEEEEEEE DASASGDRDKKAEKMAAWEDTKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKP CCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCCEEHHHHCCCC TSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNRASTELQMSDNPSDESSWNS CCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCC QGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL CCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA