| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is galU [H]
Identifier: 197117885
GI number: 197117885
Start: 1732833
End: 1733699
Strand: Direct
Name: galU [H]
Synonym: Gbem_1498
Alternate gene names: 197117885
Gene position: 1732833-1733699 (Clockwise)
Preceding gene: 197117884
Following gene: 197117887
Centisome position: 37.55
GC content: 61.59
Gene sequence:
>867_bases ATGCGCGTTAAGAAGGCCGTTTTCCCCGTCGCCGGTCTCGGCACCAGGTTTTTGCCCGCGACCAAATCGACTCCCAAGGA GATGCTGCCGCTCATAGACAAGCCGCTGGTCCAGTACGTGGTGGAGGAGGCGGTCGCGTCCGGCATCGAGCAGATCCTCT TCGTCACCGGACGCGGCAAGAGGGCGATCGAGGATCACTTCGACATCTCCTTCGAGCTGGAATCGCTTCTCTACGAGAAA GGGAAGGACCAGGAACTGCACCAGGTGCGTAAGATCGCGGAGATGGCCAACATCTTCTTCGTGCGCCAGAAGGAGGCGCT GGGGCTTGGCCACGCCATCCTCTGCGCCAAGGAATTCATCGGCGACGAGCCTTTCGCCGTCCTTTTGGGCGACGACATCA TCGACGCGCAACAGCCCTGCCTGTCCCAGCTCCTGGAGACCTACGAGAGCTACCGCTCTCCCGTACTGGCCCTGGAGCAG GTTCCCATCGAGACCATCTCCTCCTACGGCTGCGTACGCGCGAACCACCTGGCCAACCGCGCCTTCGAGGTGCTCGATCT GGTGGAGAAGCCGCCGGTCGCCGAGGCCCCGTCGGATCTCGCCATCATCGGCCGCTACATACTCACCCCGGGGATCTTCC CGATCCTGGAGAACCAGGAGCCGGGGAAGGGTGGGGAGATTCAGCTCACCGACGCCATCAAGACGCTCTCGCGCGAGGAG TCGATCTACGGCTGCCGTTTCGACGGCATACGCCACGACTGCGGGGACAAGCTGGGATTTTTGAAGGCGACGGTGGATAT GGCGCTGAAAAGGGACGAGTTCAACGGGGAGTTTCTGGCGTTTTTAAGGAAGAGGCTTGGCTGCTAA
Upstream 100 bases:
>100_bases CTAGGGAAGTACTCCGCCCCCTGTCTCCAGACGGGGGGCGGGCCGCTTTGGCGGCAGCGGGGCGCCGTGCAATTCCATGT ATTGACAAAGGAGTATCTCC
Downstream 100 bases:
>100_bases CGGAGCCTGCCGCCGCCGTTGCCGTAGTGGAAGAAGGCGATCAGCTTGAAGGTTTCGCCGCGGTACCCCTTGGGGAAGGA GCCGATGGGGCCCAGCGCGT
Product: glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase 1; UDP-glucose pyrophosphorylase 1; UDPGP 1; Uridine diphosphoglucose pyrophosphorylase 1 [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRVKKAVFPVAGLGTRFLPATKSTPKEMLPLIDKPLVQYVVEEAVASGIEQILFVTGRGKRAIEDHFDISFELESLLYEK GKDQELHQVRKIAEMANIFFVRQKEALGLGHAILCAKEFIGDEPFAVLLGDDIIDAQQPCLSQLLETYESYRSPVLALEQ VPIETISSYGCVRANHLANRAFEVLDLVEKPPVAEAPSDLAIIGRYILTPGIFPILENQEPGKGGEIQLTDAIKTLSREE SIYGCRFDGIRHDCGDKLGFLKATVDMALKRDEFNGEFLAFLRKRLGC
Sequences:
>Translated_288_residues MRVKKAVFPVAGLGTRFLPATKSTPKEMLPLIDKPLVQYVVEEAVASGIEQILFVTGRGKRAIEDHFDISFELESLLYEK GKDQELHQVRKIAEMANIFFVRQKEALGLGHAILCAKEFIGDEPFAVLLGDDIIDAQQPCLSQLLETYESYRSPVLALEQ VPIETISSYGCVRANHLANRAFEVLDLVEKPPVAEAPSDLAIIGRYILTPGIFPILENQEPGKGGEIQLTDAIKTLSREE SIYGCRFDGIRHDCGDKLGFLKATVDMALKRDEFNGEFLAFLRKRLGC >Mature_288_residues MRVKKAVFPVAGLGTRFLPATKSTPKEMLPLIDKPLVQYVVEEAVASGIEQILFVTGRGKRAIEDHFDISFELESLLYEK GKDQELHQVRKIAEMANIFFVRQKEALGLGHAILCAKEFIGDEPFAVLLGDDIIDAQQPCLSQLLETYESYRSPVLALEQ VPIETISSYGCVRANHLANRAFEVLDLVEKPPVAEAPSDLAIIGRYILTPGIFPILENQEPGKGGEIQLTDAIKTLSREE SIYGCRFDGIRHDCGDKLGFLKATVDMALKRDEFNGEFLAFLRKRLGC
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=295, Percent_Identity=45.7627118644068, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI1788355, Length=294, Percent_Identity=43.1972789115646, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1790224, Length=234, Percent_Identity=23.9316239316239, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32053; Mature: 32053
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKKAVFPVAGLGTRFLPATKSTPKEMLPLIDKPLVQYVVEEAVASGIEQILFVTGRGK CCCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC RAIEDHFDISFELESLLYEKGKDQELHQVRKIAEMANIFFVRQKEALGLGHAILCAKEFI HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHH GDEPFAVLLGDDIIDAQQPCLSQLLETYESYRSPVLALEQVPIETISSYGCVRANHLANR CCCCEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCHHHHHHHHH AFEVLDLVEKPPVAEAPSDLAIIGRYILTPGIFPILENQEPGKGGEIQLTDAIKTLSREE HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHC SIYGCRFDGIRHDCGDKLGFLKATVDMALKRDEFNGEFLAFLRKRLGC CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MRVKKAVFPVAGLGTRFLPATKSTPKEMLPLIDKPLVQYVVEEAVASGIEQILFVTGRGK CCCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC RAIEDHFDISFELESLLYEKGKDQELHQVRKIAEMANIFFVRQKEALGLGHAILCAKEFI HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHH GDEPFAVLLGDDIIDAQQPCLSQLLETYESYRSPVLALEQVPIETISSYGCVRANHLANR CCCCEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCHHHHHHHHH AFEVLDLVEKPPVAEAPSDLAIIGRYILTPGIFPILENQEPGKGGEIQLTDAIKTLSREE HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHC SIYGCRFDGIRHDCGDKLGFLKATVDMALKRDEFNGEFLAFLRKRLGC CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA