Click here to switch to the map view.

The map label for this gene is etfB-3 [H]

Identifier: 197117887

GI number: 197117887

Start: 1734798

End: 1735610

Strand: Direct

Name: etfB-3 [H]

Synonym: Gbem_1500

Alternate gene names: 197117887

Gene position: 1734798-1735610 (Clockwise)

Preceding gene: 197117885

Following gene: 197117888

Centisome position: 37.59

GC content: 63.96

Gene sequence:

>813_bases
ATGCTGGTAGTTGTCTGTGTGAAGCAAGTCCCCGATACAACGCAGGTACAGATCGACCCCGTCACCAACACCCTGATCCG
CGAGGGTGTTCCCTTCATCGTAAATCCCTACGATACCCATGCCGTAGAAGAGGGCCTGCGCTTCAAGGACCGCTTCGGCT
TCAAGGTGGTCGCCATCTCCATGGGGCCGCCGAACGCCGAGGCTACCCTGAGAAAGGCGCTGGCGCTAGGCGTCGACCGA
GCCGTGCTCCTCTCCGACCGCGTCTTTGGCGGCGCCGATACGCTGGCGACCAGCAAGGTGCTGGCGGCTGCCATCGAGAA
GCTTGGCGAGGAGGAAGAGGTCGGGGTGGTCATCTGCGGCAAGCAGACCATCGACGGCGACACCGCCCAGGTCGGCCCCG
GCATCGCCACGAGGCTTAAGTTGGCCCAGCTCACCCTGGTGGACCGGGTCGACGAACTGGAGCCTGCCGCGAAGAAGATC
AAGGTATCCCGGAAGCTCGAAGGAAGGCACGAGCACGTCGAGGCGCCGCTTCCGGTGCTCCTCACCGTGGTTAGAGAGCT
GAACCGCCCGCGCTACCCGACTGTCGCCATGCGCCTGGATTCGGCCGACGCCAAGGTGGAGCTCTGGGACAACTCGGTGC
TCGGCCTAGACGTCAACACCATCGGTCTTAAAGGTTCCCCGACCTGGGTGAGCCGGATCTTTTCGCCGGAGCGCGCCAAG
GGGGAGATGCTTGGCGACGGCGCCCGCGATCCGGACGGCGCGGCGCAGCTTTTGATCGACAAGATGATGGAGAAGGACCT
TCTCGCGCTCTAG

Upstream 100 bases:

>100_bases
CTTCGAACCGTTGACCATTTCCCCCCCCCGCTTGACCTGGATCAATTTTTTTTCGGCTGAAGTATCGTAGCTTGAAGCAT
CAAATAGAACCGAGGTGTCC

Downstream 100 bases:

>100_bases
CTTGATACCACGGTCGGGGTCCTCAAAGGCCACGCCGTGGAACAAATACCCAAACAGGAAAAGTTCATGACTGAAGCTGT
GAAGAAACCGAAGAAGCCGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLVVVCVKQVPDTTQVQIDPVTNTLIREGVPFIVNPYDTHAVEEGLRFKDRFGFKVVAISMGPPNAEATLRKALALGVDR
AVLLSDRVFGGADTLATSKVLAAAIEKLGEEEEVGVVICGKQTIDGDTAQVGPGIATRLKLAQLTLVDRVDELEPAAKKI
KVSRKLEGRHEHVEAPLPVLLTVVRELNRPRYPTVAMRLDSADAKVELWDNSVLGLDVNTIGLKGSPTWVSRIFSPERAK
GEMLGDGARDPDGAAQLLIDKMMEKDLLAL

Sequences:

>Translated_270_residues
MLVVVCVKQVPDTTQVQIDPVTNTLIREGVPFIVNPYDTHAVEEGLRFKDRFGFKVVAISMGPPNAEATLRKALALGVDR
AVLLSDRVFGGADTLATSKVLAAAIEKLGEEEEVGVVICGKQTIDGDTAQVGPGIATRLKLAQLTLVDRVDELEPAAKKI
KVSRKLEGRHEHVEAPLPVLLTVVRELNRPRYPTVAMRLDSADAKVELWDNSVLGLDVNTIGLKGSPTWVSRIFSPERAK
GEMLGDGARDPDGAAQLLIDKMMEKDLLAL
>Mature_270_residues
MLVVVCVKQVPDTTQVQIDPVTNTLIREGVPFIVNPYDTHAVEEGLRFKDRFGFKVVAISMGPPNAEATLRKALALGVDR
AVLLSDRVFGGADTLATSKVLAAAIEKLGEEEEVGVVICGKQTIDGDTAQVGPGIATRLKLAQLTLVDRVDELEPAAKKI
KVSRKLEGRHEHVEAPLPVLLTVVRELNRPRYPTVAMRLDSADAKVELWDNSVLGLDVNTIGLKGSPTWVSRIFSPERAK
GEMLGDGARDPDGAAQLLIDKMMEKDLLAL

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=220, Percent_Identity=34.5454545454545, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI62420877, Length=207, Percent_Identity=34.2995169082126, Blast_Score=99, Evalue=5e-21,
Organism=Escherichia coli, GI87081682, Length=255, Percent_Identity=25.8823529411765, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=199, Percent_Identity=32.6633165829146, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=197, Percent_Identity=34.010152284264, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651147, Length=197, Percent_Identity=31.4720812182741, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24651145, Length=197, Percent_Identity=31.4720812182741, Blast_Score=91, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29231; Mature: 29231

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVVCVKQVPDTTQVQIDPVTNTLIREGVPFIVNPYDTHAVEEGLRFKDRFGFKVVAIS
CEEEEEECCCCCCCEEEECHHHHHHHHCCCCEEECCCHHHHHHHCCCHHHCCCEEEEEEE
MGPPNAEATLRKALALGVDRAVLLSDRVFGGADTLATSKVLAAAIEKLGEEEEVGVVICG
ECCCCHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
KQTIDGDTAQVGPGIATRLKLAQLTLVDRVDELEPAAKKIKVSRKLEGRHEHVEAPLPVL
CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCHHHH
LTVVRELNRPRYPTVAMRLDSADAKVELWDNSVLGLDVNTIGLKGSPTWVSRIFSPERAK
HHHHHHHCCCCCCEEEEEECCCCCEEEEECCEEEEEEEEEECCCCCHHHHHHHCCCCCCC
GEMLGDGARDPDGAAQLLIDKMMEKDLLAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVVVCVKQVPDTTQVQIDPVTNTLIREGVPFIVNPYDTHAVEEGLRFKDRFGFKVVAIS
CEEEEEECCCCCCCEEEECHHHHHHHHCCCCEEECCCHHHHHHHCCCHHHCCCEEEEEEE
MGPPNAEATLRKALALGVDRAVLLSDRVFGGADTLATSKVLAAAIEKLGEEEEVGVVICG
ECCCCHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
KQTIDGDTAQVGPGIATRLKLAQLTLVDRVDELEPAAKKIKVSRKLEGRHEHVEAPLPVL
CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCHHHH
LTVVRELNRPRYPTVAMRLDSADAKVELWDNSVLGLDVNTIGLKGSPTWVSRIFSPERAK
HHHHHHHCCCCCCEEEEEECCCCCEEEEECCEEEEEEEEEECCCCCHHHHHHHCCCCCCC
GEMLGDGARDPDGAAQLLIDKMMEKDLLAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA