Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is bamR [H]

Identifier: 197117819

GI number: 197117819

Start: 1654628

End: 1655434

Strand: Direct

Name: bamR [H]

Synonym: Gbem_1432

Alternate gene names: 197117819

Gene position: 1654628-1655434 (Clockwise)

Preceding gene: 197117818

Following gene: 197117820

Centisome position: 35.85

GC content: 65.92

Gene sequence:

>807_bases
ATGAGCCAAGCCGCTACCCAAGCACCGCAAACCGCCGCAGCCGACTCGCCGCTCAAGGTGTCTCTTGAGCGCGACGGCCG
CCTTTTGAAACTCACCCTCGCTCGTCCGAAGGCGAACATCGTCGACGCGGCCATGATCGGGGCGCTCCTGCAGGCGCTGG
ACCAGCACCTGAAAGAACCCCGCCTGAGGGGGGTGCTGCTCACCGCGGAGGGGCCGCATTTCAGCTTCGGCGCCAGCGTG
GACGAGCATATGCCCGACTCCTGCGCCCAGATGCTGAAGTCGCTGCATGCGCTTGTGCTGAAGCTCGTCGAGAGCCCGGT
CCCAGTGCTGGTTGCGGTGCGCGGCCAGTGCCTGGGGGGCGGCCTCGAAGTAGTCGCCGCCTGCAACCTGATCTTCGCGG
CACCCAACGCGCAGCTGGGGCAGCCGGAGATAAAGCTCGCCGTTTTCGCCCCTGCCGCTTCTTGCCTCTTACCTGAGCGG
ATCGGGCAGGCCCAGGCGGAGGACCTCCTCTTCTCTGGACGCAGCGTGAGCGCCGAGGAGGCGCATCTCATGGGGCTCGT
ATCGGTCATCGCCGAGGACCCGGACCAGGCGGCCCTGGATTACTTCGACAAGCACCTGGCCCCGGTTTCCGCCAGCACGC
TGCGTTACGCGGTGCGCGCGGCCCGGCAGGACAAGGCCTCAAGGATCAGGGCCAAGATCTCCTTCGTCGAGAAGCTCTAC
CTCGAGGAGATGATGAAGACTCACGACTCGGTGGAAGGCCTCACCGCCTTCATCGAAAAGCGGCAGCCTACCTGGCAGGA
CCGCTAG

Upstream 100 bases:

>100_bases
GCATCCCCTGGACAACATCAACCAGGTGTTTGCCTCCGCACATGCCCACAAGCTCACCAGGCGCGCCATCTTAGTGCCGG
GTCTTTCCTAGGAGGACGCC

Downstream 100 bases:

>100_bases
TCCAACGAACTCGTCTCCCGACCCTGGGAGTAAGGGGGGCTGCCGTTCTATCACCCGCGGCAGTCCCCCAGAGTCCAAAC
CATAGTTAGAGCCGACAGGG

Product: cyclohexa-1,5-dienecarbonyl-CoA hydratase

Products: NA

Alternate protein names: Cyclohexa-1,5-diene-1-carboxyl-CoA hydratase; Dienoyl-CoA hydratase [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSQAATQAPQTAAADSPLKVSLERDGRLLKLTLARPKANIVDAAMIGALLQALDQHLKEPRLRGVLLTAEGPHFSFGASV
DEHMPDSCAQMLKSLHALVLKLVESPVPVLVAVRGQCLGGGLEVVAACNLIFAAPNAQLGQPEIKLAVFAPAASCLLPER
IGQAQAEDLLFSGRSVSAEEAHLMGLVSVIAEDPDQAALDYFDKHLAPVSASTLRYAVRAARQDKASRIRAKISFVEKLY
LEEMMKTHDSVEGLTAFIEKRQPTWQDR

Sequences:

>Translated_268_residues
MSQAATQAPQTAAADSPLKVSLERDGRLLKLTLARPKANIVDAAMIGALLQALDQHLKEPRLRGVLLTAEGPHFSFGASV
DEHMPDSCAQMLKSLHALVLKLVESPVPVLVAVRGQCLGGGLEVVAACNLIFAAPNAQLGQPEIKLAVFAPAASCLLPER
IGQAQAEDLLFSGRSVSAEEAHLMGLVSVIAEDPDQAALDYFDKHLAPVSASTLRYAVRAARQDKASRIRAKISFVEKLY
LEEMMKTHDSVEGLTAFIEKRQPTWQDR
>Mature_267_residues
SQAATQAPQTAAADSPLKVSLERDGRLLKLTLARPKANIVDAAMIGALLQALDQHLKEPRLRGVLLTAEGPHFSFGASVD
EHMPDSCAQMLKSLHALVLKLVESPVPVLVAVRGQCLGGGLEVVAACNLIFAAPNAQLGQPEIKLAVFAPAASCLLPERI
GQAQAEDLLFSGRSVSAEEAHLMGLVSVIAEDPDQAALDYFDKHLAPVSASTLRYAVRAARQDKASRIRAKISFVEKLYL
EEMMKTHDSVEGLTAFIEKRQPTWQDR

Specific function: Catalyzes the hydration of cyclohexa-1,5-diene-1- carboxyl-CoA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI31542718, Length=259, Percent_Identity=25.4826254826255, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI194097323, Length=250, Percent_Identity=30, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI4502327, Length=238, Percent_Identity=28.9915966386555, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI20127408, Length=203, Percent_Identity=25.615763546798, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI70995211, Length=256, Percent_Identity=23.828125, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI68989263, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=30.6818181818182, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787659, Length=253, Percent_Identity=29.2490118577075, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1790281, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788682, Length=155, Percent_Identity=30.3225806451613, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787660, Length=246, Percent_Identity=26.8292682926829, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554946, Length=255, Percent_Identity=29.0196078431373, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=27.6264591439689, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17540306, Length=287, Percent_Identity=23.6933797909408, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17536985, Length=295, Percent_Identity=20.6779661016949, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17540714, Length=209, Percent_Identity=25.8373205741627, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17558304, Length=184, Percent_Identity=24.4565217391304, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653139, Length=251, Percent_Identity=29.4820717131474, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI20129971, Length=273, Percent_Identity=27.1062271062271, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24653477, Length=273, Percent_Identity=27.1062271062271, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19922422, Length=265, Percent_Identity=27.5471698113208, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19920382, Length=186, Percent_Identity=27.9569892473118, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR017602 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.100 [H]

Molecular weight: Translated: 28863; Mature: 28732

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAATQAPQTAAADSPLKVSLERDGRLLKLTLARPKANIVDAAMIGALLQALDQHLKEP
CCCCHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
RLRGVLLTAEGPHFSFGASVDEHMPDSCAQMLKSLHALVLKLVESPVPVLVAVRGQCLGG
CCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCC
GLEVVAACNLIFAAPNAQLGQPEIKLAVFAPAASCLLPERIGQAQAEDLLFSGRSVSAEE
HHHHHHHHHHHEECCCCCCCCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCHHH
AHLMGLVSVIAEDPDQAALDYFDKHLAPVSASTLRYAVRAARQDKASRIRAKISFVEKLY
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEMMKTHDSVEGLTAFIEKRQPTWQDR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SQAATQAPQTAAADSPLKVSLERDGRLLKLTLARPKANIVDAAMIGALLQALDQHLKEP
CCCHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
RLRGVLLTAEGPHFSFGASVDEHMPDSCAQMLKSLHALVLKLVESPVPVLVAVRGQCLGG
CCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCC
GLEVVAACNLIFAAPNAQLGQPEIKLAVFAPAASCLLPERIGQAQAEDLLFSGRSVSAEE
HHHHHHHHHHHEECCCCCCCCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCHHH
AHLMGLVSVIAEDPDQAALDYFDKHLAPVSASTLRYAVRAARQDKASRIRAKISFVEKLY
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEMMKTHDSVEGLTAFIEKRQPTWQDR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746358; 9738901 [H]