| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is bamQ [C]
Identifier: 197117818
GI number: 197117818
Start: 1653545
End: 1654618
Strand: Direct
Name: bamQ [C]
Synonym: Gbem_1431
Alternate gene names: 197117818
Gene position: 1653545-1654618 (Clockwise)
Preceding gene: 197117817
Following gene: 197117819
Centisome position: 35.83
GC content: 65.74
Gene sequence:
>1074_bases ATGTCCAAGTCAGCGTATCGCTGGTCCATGACCGCCGTCGGTGAACCGATGCAAAAGGGTGAATTCGCCCCTGCGCCGGG CGCGGGAGAAGTCGTCGTCGAGGTCGCCGGCTGCGGCGTCTGCCACACCGACCTTGGTTTCTATTACAGCGGCGTCCGCT TCAACCACCCCGCACCGCTCACGCTGGGGCACGAGATCAGCGGCCGCGTGGTCACGGCGGGCGAGGGGGCTGGCCAGTGG GTTGGCAAGGCGGTGCTCATTCCGGCGGTCATCCCCTGCGGCGAATGCGACCTCTGCCTCTCCAGTCACGGCACCATCTG CCGCGCGCAGCAGATGCCCGGCAACGACATCCACGGCGGCTTCGCCTCCCACATCGTGGTTCCGGCTAAGACCCTCTGCC CGGTCGACGAGAAGCGCCTCGCCGCGGCAGGGCTTGAGCTTGCCGACATCTCGGTCGTGGCCGACGCGGTGACCACACCT TACCAGGCAGCGGTGCAGGCCGAGGTCCAGCCCGGCGACGTCGCCATCGTGATCGGCGTGGGCGGGGTAGGCGGCTACGC GGTGCAGGTGGCCAACGCTCTCGGCGCAACCGTCATCGCCATCGACGTGGACCCGGTGAAGCTGGAAAACGTTGGCAAGC ACGGCGCGGCGCTCACCCTCAACTCCCGCGAGATCGCCGGCAAGGAACTGAAGAAGGCGATAAACGACTTCGTGAAGGCG AAGGGGCTGAAGCAGACCTGCTGGAAGATATTCGAATGCTCCGGCAGCACCCCCGGCCAGGAGACCGCCTTCAGCCTCCT CACCTACGGGGCCACCCTCTCCGTCGTCGGCTTCACCATGGACAAGATCGAGCTGCGCCTCTCAAACCTGATGGCGTTCC ACGCCAGGGCCCTTGGGAACTGGGGCTGTCTGACCGAACTGTATCCGGCCGCGCTCGACCTCGTGCTCGACGGAAAGGTC GCCCTGACGCCGTTCATCGAGAAGCATCCCCTGGACAACATCAACCAGGTGTTTGCCTCCGCACATGCCCACAAGCTCAC CAGGCGCGCCATCTTAGTGCCGGGTCTTTCCTAG
Upstream 100 bases:
>100_bases CTTGACAGCTAAATAAGCATTGTGGTACTTATTTACCATAACAGGATTTGCCACCGAAAACGATTCGATAAAAAACCACT TTAAGCAAGGAGGAAGCTTT
Downstream 100 bases:
>100_bases GAGGACGCCATGAGCCAAGCCGCTACCCAAGCACCGCAAACCGCCGCAGCCGACTCGCCGCTCAAGGTGTCTCTTGAGCG CGACGGCCGCCTTTTGAAAC
Product: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
Products: NA
Alternate protein names: ADH-HT [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSKSAYRWSMTAVGEPMQKGEFAPAPGAGEVVVEVAGCGVCHTDLGFYYSGVRFNHPAPLTLGHEISGRVVTAGEGAGQW VGKAVLIPAVIPCGECDLCLSSHGTICRAQQMPGNDIHGGFASHIVVPAKTLCPVDEKRLAAAGLELADISVVADAVTTP YQAAVQAEVQPGDVAIVIGVGGVGGYAVQVANALGATVIAIDVDPVKLENVGKHGAALTLNSREIAGKELKKAINDFVKA KGLKQTCWKIFECSGSTPGQETAFSLLTYGATLSVVGFTMDKIELRLSNLMAFHARALGNWGCLTELYPAALDLVLDGKV ALTPFIEKHPLDNINQVFASAHAHKLTRRAILVPGLS
Sequences:
>Translated_357_residues MSKSAYRWSMTAVGEPMQKGEFAPAPGAGEVVVEVAGCGVCHTDLGFYYSGVRFNHPAPLTLGHEISGRVVTAGEGAGQW VGKAVLIPAVIPCGECDLCLSSHGTICRAQQMPGNDIHGGFASHIVVPAKTLCPVDEKRLAAAGLELADISVVADAVTTP YQAAVQAEVQPGDVAIVIGVGGVGGYAVQVANALGATVIAIDVDPVKLENVGKHGAALTLNSREIAGKELKKAINDFVKA KGLKQTCWKIFECSGSTPGQETAFSLLTYGATLSVVGFTMDKIELRLSNLMAFHARALGNWGCLTELYPAALDLVLDGKV ALTPFIEKHPLDNINQVFASAHAHKLTRRAILVPGLS >Mature_356_residues SKSAYRWSMTAVGEPMQKGEFAPAPGAGEVVVEVAGCGVCHTDLGFYYSGVRFNHPAPLTLGHEISGRVVTAGEGAGQWV GKAVLIPAVIPCGECDLCLSSHGTICRAQQMPGNDIHGGFASHIVVPAKTLCPVDEKRLAAAGLELADISVVADAVTTPY QAAVQAEVQPGDVAIVIGVGGVGGYAVQVANALGATVIAIDVDPVKLENVGKHGAALTLNSREIAGKELKKAINDFVKAK GLKQTCWKIFECSGSTPGQETAFSLLTYGATLSVVGFTMDKIELRLSNLMAFHARALGNWGCLTELYPAALDLVLDGKVA LTPFIEKHPLDNINQVFASAHAHKLTRRAILVPGLS
Specific function: Thermophilic NAD(+)-dependent alcohol dehydrogenase. Bears mainly an ethanol-dehydrogenase activity [H]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI71565154, Length=378, Percent_Identity=25.9259259259259, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI156523966, Length=378, Percent_Identity=26.984126984127, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI4501939, Length=345, Percent_Identity=27.2463768115942, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI34577061, Length=263, Percent_Identity=30.4182509505703, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4501929, Length=382, Percent_Identity=26.1780104712042, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4501933, Length=261, Percent_Identity=28.735632183908, Blast_Score=72, Evalue=9e-13, Organism=Escherichia coli, GI1788407, Length=339, Percent_Identity=26.5486725663717, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081918, Length=328, Percent_Identity=25.9146341463415, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786552, Length=366, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI226510992, Length=323, Percent_Identity=25.6965944272446, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87082125, Length=302, Percent_Identity=25.8278145695364, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790045, Length=306, Percent_Identity=24.5098039215686, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787863, Length=267, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788075, Length=319, Percent_Identity=25.0783699059561, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788073, Length=263, Percent_Identity=27.3764258555133, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082401, Length=337, Percent_Identity=25.5192878338279, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1790718, Length=323, Percent_Identity=23.2198142414861, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786518, Length=222, Percent_Identity=30.6306306306306, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17562876, Length=327, Percent_Identity=27.217125382263, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17562878, Length=320, Percent_Identity=27.8125, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71988145, Length=183, Percent_Identity=28.4153005464481, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562584, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17562582, Length=183, Percent_Identity=29.5081967213115, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323729, Length=201, Percent_Identity=30.8457711442786, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320033, Length=362, Percent_Identity=27.9005524861878, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322619, Length=336, Percent_Identity=25.297619047619, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319955, Length=336, Percent_Identity=25.297619047619, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323099, Length=341, Percent_Identity=25.5131964809384, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=189, Percent_Identity=30.6878306878307, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=182, Percent_Identity=31.3186813186813, Blast_Score=66, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6319258, Length=323, Percent_Identity=22.9102167182663, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319621, Length=182, Percent_Identity=30.7692307692308, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI17737895, Length=365, Percent_Identity=27.1232876712329, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 37289; Mature: 37158
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00059 ADH_ZINC ; PS00222 IGF_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSAYRWSMTAVGEPMQKGEFAPAPGAGEVVVEVAGCGVCHTDLGFYYSGVRFNHPAPL CCCCCEEEEEHHCCCCHHCCCCCCCCCCCCEEEEEECCCEEECCCCCEECCEEECCCCCE TLGHEISGRVVTAGEGAGQWVGKAVLIPAVIPCGECDLCLSSHGTICRAQQMPGNDIHGG EECCCCCCEEEECCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC FASHIVVPAKTLCPVDEKRLAAAGLELADISVVADAVTTPYQAAVQAEVQPGDVAIVIGV HHCEEEECHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEEE GGVGGYAVQVANALGATVIAIDVDPVKLENVGKHGAALTLNSREIAGKELKKAINDFVKA CCCCHHHHHHHHHCCCEEEEEECCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KGLKQTCWKIFECSGSTPGQETAFSLLTYGATLSVVGFTMDKIELRLSNLMAFHARALGN CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC WGCLTELYPAALDLVLDGKVALTPFIEKHPLDNINQVFASAHAHKLTRRAILVPGLS CCCHHHHHHHHHEEEECCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHCEEECCCCC >Mature Secondary Structure SKSAYRWSMTAVGEPMQKGEFAPAPGAGEVVVEVAGCGVCHTDLGFYYSGVRFNHPAPL CCCCEEEEEHHCCCCHHCCCCCCCCCCCCEEEEEECCCEEECCCCCEECCEEECCCCCE TLGHEISGRVVTAGEGAGQWVGKAVLIPAVIPCGECDLCLSSHGTICRAQQMPGNDIHGG EECCCCCCEEEECCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC FASHIVVPAKTLCPVDEKRLAAAGLELADISVVADAVTTPYQAAVQAEVQPGDVAIVIGV HHCEEEECHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEEE GGVGGYAVQVANALGATVIAIDVDPVKLENVGKHGAALTLNSREIAGKELKKAINDFVKA CCCCHHHHHHHHHCCCEEEEEECCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KGLKQTCWKIFECSGSTPGQETAFSLLTYGATLSVVGFTMDKIELRLSNLMAFHARALGN CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC WGCLTELYPAALDLVLDGKVALTPFIEKHPLDNINQVFASAHAHKLTRRAILVPGLS CCCHHHHHHHHHEEEECCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8020473 [H]