| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cat2 [H]
Identifier: 197117817
GI number: 197117817
Start: 1651375
End: 1653225
Strand: Direct
Name: cat2 [H]
Synonym: Gbem_1430
Alternate gene names: 197117817
Gene position: 1651375-1653225 (Clockwise)
Preceding gene: 197117814
Following gene: 197117818
Centisome position: 35.78
GC content: 63.8
Gene sequence:
>1851_bases ATGAACGAAGAACTAAAGCAGTTGTATCGGGACCGGCTGACCACCGCGGACGAGGCGGTACGTCATCTCCAGTCGGGGTG GCGCGTTTTTCTCGGGTCGGGGTGCGCGGTACCGGGGGAGCTCGTCGCCGCGCTGGCGCGGCAGGCCGACCGGTTCCACG ACGTGGAACTGATCCAGCTCCTCACCTTTGGCACTGGGCAATACCTGAACGGCAAGGATGCCGGAAGGCTGCGGCACAAC TCCTTTTTCATCAGTGAAAATATCCGTCAGGCGGTGTGCGACGGCCGGGCCGACTACACCCCCATCTTCCTGAGTGAGAT CCCGGAACTGATCCGGTCGGGCCAGAGGGGGAACCAGGCTGCGCTGTTGCAGGTGTCGCCCCCGGACCGACACGGTTACT GCAGCATGGGGGTGAACGTGGACATCCAGCGGGCCGCGCTCGACCGGGCGAAGCTGGTGATCGCCGAGGTGAACCCGCGG ATGCCGCGCACCTGCGGTGACAGCTACGTACACCTAAGCCGCCTGGACCTTCTGGTGGAGACGGACCATCCGATTCTTGT CTCCGAGGCGAAGGCCCCCGACGAGGTGGAGCAGCAGATCGGGTACCACATCTCGCGGCTGGTGGAAAACGGGAGCTGCC TGCAGCTGGGGATCGGCACCATACCGAGCACCGTGCTGCAGTTCATAGCGGACAAACGCGATCTGGGGGTCCACAGCGAG ATGTTCAGCGACGCCTTGATCCCGCTCATCGAAGAGGGGAACGTCACCAACCGTCTGAAGCGGGTGCATCCGGGGAAGAC GGTGGCGAGTTTCGTCATCGGCAGCCGCAAGCTGTACGACTTCGTCGACGGCAACGTCGGCGTCGAGTTCCATCCATCCG ATTTCGTCAACGACCCCAGGGTCATCTCCATGAACGACAAGGTGGTGGCGATAAACTCGGCGCTGCAGGTCGACCTGACC GGGCAGATATGCGCCGACAGCATCGGATACCAGTTCTACAGCGGCATCGGCGGCCAGGTGGACTTCGCGCGCGGCGCGGC CATGAGCCGGGGGGGGAAGCCGATCATCGCCGTTCGCAGCACCGCCCGGGACGGGAGCATCAGCCGCATCGTGCATCGGA TCGACGACGGCGCGGGCGTGGTCACCAGCCGCGGCGACGCCCACTACGTGGTTTCCGAGTACGGCATCGCCTACCTGCAC GGGAAGACCATAAGAGAACGCGCCTTGGCGCTTATCTCCATAGCCCATCCGGAGTACCGCCGGGAGTTGCTCGATTTCGT CAAGAAGAAGCACTACGTTTACGAGGACGAGCAGGTGTGGCGGCAGGCGCTGGACAAGTACCCGGCGAACCTGGAGGAGG ATAGATCCTTCGGAGGAATGACGATGCAGGTGAGGCCCCTGAAGGCGACCGACGAGCGGACGCTGCAGGAGTTCTTCTAC AGCCTCGACGCGGAGACGGTCTACCACCGCTTCTTCGGTCCGAAGCTGCAGATGGCGCACCTTGAAGCGGCAAAGCAAGT CTGCGTCGACTATAGCGGCCGCATGGCGCTGGCCGCCTTTCGCCACGAGGACCAGGCCGAATGCATGGTGGCGGTGGCTC GCTACGAGGTCAACCCCCGGAGCAACATGGCGGAGACGGCGGTGGTGGTGCACCAGGATTACCGCAGGAAAGGGCTCGCC GGCTACCTGCTGCGCCAGCTGGAGCGCCACGCCAAAGAGCAGGGAATCGAGGGCTTCTGCGCCGAGATCCTCCCGGAAAA CGCCGCGATGCTCCGTTACCACAGAGGCCTCGGGCACACCCTGGTGCACTCCCCGGAGACCGAGACCTATCATGTGGAAT ACCGGTTCTAA
Upstream 100 bases:
>100_bases CTAATGTTGTTGGGGAAACTTCGTGTAACGTTTTGAGGGTCCGTGTAAAAAACTGAGGGCGCGGCGGGATGCTGGGAAAC GGCGGGAGAGGGGGCAGGCG
Downstream 100 bases:
>100_bases CCACCTACCCCCACCCCCTAGCCCCCTCCCGCAAGGGGAGGGGGATTGAACCAGGAGGAGCTGCCTGTCTCCCCTCGCCC TCTGGGAGAGGGGCGGGGGT
Product: acyl-CoA--carboxylate CoA transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MNEELKQLYRDRLTTADEAVRHLQSGWRVFLGSGCAVPGELVAALARQADRFHDVELIQLLTFGTGQYLNGKDAGRLRHN SFFISENIRQAVCDGRADYTPIFLSEIPELIRSGQRGNQAALLQVSPPDRHGYCSMGVNVDIQRAALDRAKLVIAEVNPR MPRTCGDSYVHLSRLDLLVETDHPILVSEAKAPDEVEQQIGYHISRLVENGSCLQLGIGTIPSTVLQFIADKRDLGVHSE MFSDALIPLIEEGNVTNRLKRVHPGKTVASFVIGSRKLYDFVDGNVGVEFHPSDFVNDPRVISMNDKVVAINSALQVDLT GQICADSIGYQFYSGIGGQVDFARGAAMSRGGKPIIAVRSTARDGSISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPEYRRELLDFVKKKHYVYEDEQVWRQALDKYPANLEEDRSFGGMTMQVRPLKATDERTLQEFFY SLDAETVYHRFFGPKLQMAHLEAAKQVCVDYSGRMALAAFRHEDQAECMVAVARYEVNPRSNMAETAVVVHQDYRRKGLA GYLLRQLERHAKEQGIEGFCAEILPENAAMLRYHRGLGHTLVHSPETETYHVEYRF
Sequences:
>Translated_616_residues MNEELKQLYRDRLTTADEAVRHLQSGWRVFLGSGCAVPGELVAALARQADRFHDVELIQLLTFGTGQYLNGKDAGRLRHN SFFISENIRQAVCDGRADYTPIFLSEIPELIRSGQRGNQAALLQVSPPDRHGYCSMGVNVDIQRAALDRAKLVIAEVNPR MPRTCGDSYVHLSRLDLLVETDHPILVSEAKAPDEVEQQIGYHISRLVENGSCLQLGIGTIPSTVLQFIADKRDLGVHSE MFSDALIPLIEEGNVTNRLKRVHPGKTVASFVIGSRKLYDFVDGNVGVEFHPSDFVNDPRVISMNDKVVAINSALQVDLT GQICADSIGYQFYSGIGGQVDFARGAAMSRGGKPIIAVRSTARDGSISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPEYRRELLDFVKKKHYVYEDEQVWRQALDKYPANLEEDRSFGGMTMQVRPLKATDERTLQEFFY SLDAETVYHRFFGPKLQMAHLEAAKQVCVDYSGRMALAAFRHEDQAECMVAVARYEVNPRSNMAETAVVVHQDYRRKGLA GYLLRQLERHAKEQGIEGFCAEILPENAAMLRYHRGLGHTLVHSPETETYHVEYRF >Mature_616_residues MNEELKQLYRDRLTTADEAVRHLQSGWRVFLGSGCAVPGELVAALARQADRFHDVELIQLLTFGTGQYLNGKDAGRLRHN SFFISENIRQAVCDGRADYTPIFLSEIPELIRSGQRGNQAALLQVSPPDRHGYCSMGVNVDIQRAALDRAKLVIAEVNPR MPRTCGDSYVHLSRLDLLVETDHPILVSEAKAPDEVEQQIGYHISRLVENGSCLQLGIGTIPSTVLQFIADKRDLGVHSE MFSDALIPLIEEGNVTNRLKRVHPGKTVASFVIGSRKLYDFVDGNVGVEFHPSDFVNDPRVISMNDKVVAINSALQVDLT GQICADSIGYQFYSGIGGQVDFARGAAMSRGGKPIIAVRSTARDGSISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLH GKTIRERALALISIAHPEYRRELLDFVKKKHYVYEDEQVWRQALDKYPANLEEDRSFGGMTMQVRPLKATDERTLQEFFY SLDAETVYHRFFGPKLQMAHLEAAKQVCVDYSGRMALAAFRHEDQAECMVAVARYEVNPRSNMAETAVVVHQDYRRKGLA GYLLRQLERHAKEQGIEGFCAEILPENAAMLRYHRGLGHTLVHSPETETYHVEYRF
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=470, Percent_Identity=25.9574468085106, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788938, Length=166, Percent_Identity=30.7228915662651, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI32563853, Length=419, Percent_Identity=46.0620525059666, Blast_Score=355, Evalue=3e-98, Organism=Caenorhabditis elegans, GI17538151, Length=427, Percent_Identity=43.559718969555, Blast_Score=335, Evalue=4e-92, Organism=Drosophila melanogaster, GI21358615, Length=416, Percent_Identity=45.6730769230769, Blast_Score=369, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 69018; Mature: 69018
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEELKQLYRDRLTTADEAVRHLQSGWRVFLGSGCAVPGELVAALARQADRFHDVELIQL CCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH LTFGTGQYLNGKDAGRLRHNSFFISENIRQAVCDGRADYTPIFLSEIPELIRSGQRGNQA HHCCCCCCCCCCCCCCEECCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCE ALLQVSPPDRHGYCSMGVNVDIQRAALDRAKLVIAEVNPRMPRTCGDSYVHLSRLDLLVE EEEEECCCCCCCEEEECCCEEHHHHHHCHHEEEEEECCCCCCCCCCCCEEEHHHEEEEEE TDHPILVSEAKAPDEVEQQIGYHISRLVENGSCLQLGIGTIPSTVLQFIADKRDLGVHSE CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHH MFSDALIPLIEEGNVTNRLKRVHPGKTVASFVIGSRKLYDFVDGNVGVEFHPSDFVNDPR HHHHHHCHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCEEECCHHCCCCCE VISMNDKVVAINSALQVDLTGQICADSIGYQFYSGIGGQVDFARGAAMSRGGKPIIAVRS EEEECCCEEEECCEEEEEECCHHHHHHHCHHHHHCCCCCEEHHCCHHHCCCCCEEEEEEC TARDGSISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLHGKTIRERALALISIAHPEYR CCCCCHHHHHHHHHCCCCCEEECCCCCEEEHHHCCEEEEECCHHHHHHHHHHHCCCHHHH RELLDFVKKKHYVYEDEQVWRQALDKYPANLEEDRSFGGMTMQVRPLKATDERTLQEFFY HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH SLDAETVYHRFFGPKLQMAHLEAAKQVCVDYSGRMALAAFRHEDQAECMVAVARYEVNPR HCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHEECCCC SNMAETAVVVHQDYRRKGLAGYLLRQLERHAKEQGIEGFCAEILPENAAMLRYHRGLGHT CCHHHHHEEEEHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCC LVHSPETETYHVEYRF EECCCCCCEEEEEEEC >Mature Secondary Structure MNEELKQLYRDRLTTADEAVRHLQSGWRVFLGSGCAVPGELVAALARQADRFHDVELIQL CCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH LTFGTGQYLNGKDAGRLRHNSFFISENIRQAVCDGRADYTPIFLSEIPELIRSGQRGNQA HHCCCCCCCCCCCCCCEECCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCE ALLQVSPPDRHGYCSMGVNVDIQRAALDRAKLVIAEVNPRMPRTCGDSYVHLSRLDLLVE EEEEECCCCCCCEEEECCCEEHHHHHHCHHEEEEEECCCCCCCCCCCCEEEHHHEEEEEE TDHPILVSEAKAPDEVEQQIGYHISRLVENGSCLQLGIGTIPSTVLQFIADKRDLGVHSE CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHH MFSDALIPLIEEGNVTNRLKRVHPGKTVASFVIGSRKLYDFVDGNVGVEFHPSDFVNDPR HHHHHHCHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCEEECCHHCCCCCE VISMNDKVVAINSALQVDLTGQICADSIGYQFYSGIGGQVDFARGAAMSRGGKPIIAVRS EEEECCCEEEECCEEEEEECCHHHHHHHCHHHHHCCCCCEEHHCCHHHCCCCCEEEEEEC TARDGSISRIVHRIDDGAGVVTSRGDAHYVVSEYGIAYLHGKTIRERALALISIAHPEYR CCCCCHHHHHHHHHCCCCCEEECCCCCEEEHHHCCEEEEECCHHHHHHHHHHHCCCHHHH RELLDFVKKKHYVYEDEQVWRQALDKYPANLEEDRSFGGMTMQVRPLKATDERTLQEFFY HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH SLDAETVYHRFFGPKLQMAHLEAAKQVCVDYSGRMALAAFRHEDQAECMVAVARYEVNPR HCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHEECCCC SNMAETAVVVHQDYRRKGLAGYLLRQLERHAKEQGIEGFCAEILPENAAMLRYHRGLGHT CCHHHHHEEEEHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCC LVHSPETETYHVEYRF EECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]