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The map label for this gene is ybeQ [H]

Identifier: 197117497

GI number: 197117497

Start: 1280370

End: 1281398

Strand: Direct

Name: ybeQ [H]

Synonym: Gbem_1108

Alternate gene names: 197117497

Gene position: 1280370-1281398 (Clockwise)

Preceding gene: 197117496

Following gene: 197117498

Centisome position: 27.74

GC content: 62.97

Gene sequence:

>1029_bases
ATGAGAAGTGGGGGAGCCGCGTGGGGCCTTGTTCTGCCTGTGTGGCTCCTCTTTTTACTCACCTTCCCGCTTTATGGGGT
GTCGCCGGCGGCGGCCGACTTTGAAGCAGGCGTGGCGGCGTACGACAGGGGGGACTTCGAAGCGGCGCGGCGTGAGTTCG
CCGCGGACGACAGCCCCGAGGCTTCCTTCTACCTCGGCCGTATCTTCGATCTGGGACAGGGGGGGCCACGGGACCCGGAC
CTGGCGGCTCGCTACTACGGCATCGCCAGGGGCGGAGGCTTTACCGTTTCCGGGAGCCAAGGGGTGAAGTTTCGGTGGTA
CCTATCCGCCGCTGAGCGGGGTGACGCATCGAGCCAGGCCCGGATTGCTGAAATGTACCTTGAGGGAGATGGAGTCAAAA
AGGACGCCCAACAGGCGGAACAGTGGCTGCTGGAGGCTGCACAGAACGATTATGCTCCAGCCCAGTGCAGTCTGTATGAG
TTTTACTCCAACGGGGTCGGGGGGGAGAAGGACCCCGGCCTGGCGCTGTCCTGGCTGCACCGGGCTGCCGACGGCGACTA
TGTGAGGGCCCTGACCACCCTCGCCGTCCTGAACTACAGGGGCGAAGGAGTCACTCAGGACAAGGCCGAGGCGGCAAGGC
TCTATACAAGGGCTGCGGCGCAGGGAGACGTCAATGCCGCCTACAGTCTAGGCGTCATGTACTACCACGGCGACGGGGTC
GGCCAGGATTACTGCAAAGCCGCGCGCTTGTTCGACTTCACGGCGCGGCGCGGAGATTCGGCCGCTCAAGGTTTGCTGGG
CTTTCTTTACGACAACGGCTGGTGCGTTCCGCGTGACAAGTTCGCTGCCGCCATGTGGTATCTTGCCGCGGCTCGTGGCG
GAAACGGCCAAGCACAGTACAACATCGCGGTCATGTACCTGAATGGGGAGTTAGGCCGCACCGATCGGAACATGGGGCTG
GAGTTCATGGAAAAAGCCGCTGCCAACGGAGTTCCCGAGGCGCGCGAGGCTTTGGTGAAGCTTAAGTAA

Upstream 100 bases:

>100_bases
TTGGAGTGCGACGCGACAGTGAGGAGGCCGTCCTGTGGCTGCGAAAAGCCGCGGCACAGGGAGAGCCGACAGCGGTGGCT
GCATTGAAAGAGGTGGGAAA

Downstream 100 bases:

>100_bases
TTTGACGGGGGAATTGATGAAGAGAGCATGTATCGTTGCAATTATAGCTGTTTGTCTTTCCTGCGGGGCCGTTTGGGCGT
CGACTGCGGGCACTGCGCCG

Product: SEL1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRSGGAAWGLVLPVWLLFLLTFPLYGVSPAAADFEAGVAAYDRGDFEAARREFAADDSPEASFYLGRIFDLGQGGPRDPD
LAARYYGIARGGGFTVSGSQGVKFRWYLSAAERGDASSQARIAEMYLEGDGVKKDAQQAEQWLLEAAQNDYAPAQCSLYE
FYSNGVGGEKDPGLALSWLHRAADGDYVRALTTLAVLNYRGEGVTQDKAEAARLYTRAAAQGDVNAAYSLGVMYYHGDGV
GQDYCKAARLFDFTARRGDSAAQGLLGFLYDNGWCVPRDKFAAAMWYLAAARGGNGQAQYNIAVMYLNGELGRTDRNMGL
EFMEKAAANGVPEAREALVKLK

Sequences:

>Translated_342_residues
MRSGGAAWGLVLPVWLLFLLTFPLYGVSPAAADFEAGVAAYDRGDFEAARREFAADDSPEASFYLGRIFDLGQGGPRDPD
LAARYYGIARGGGFTVSGSQGVKFRWYLSAAERGDASSQARIAEMYLEGDGVKKDAQQAEQWLLEAAQNDYAPAQCSLYE
FYSNGVGGEKDPGLALSWLHRAADGDYVRALTTLAVLNYRGEGVTQDKAEAARLYTRAAAQGDVNAAYSLGVMYYHGDGV
GQDYCKAARLFDFTARRGDSAAQGLLGFLYDNGWCVPRDKFAAAMWYLAAARGGNGQAQYNIAVMYLNGELGRTDRNMGL
EFMEKAAANGVPEAREALVKLK
>Mature_342_residues
MRSGGAAWGLVLPVWLLFLLTFPLYGVSPAAADFEAGVAAYDRGDFEAARREFAADDSPEASFYLGRIFDLGQGGPRDPD
LAARYYGIARGGGFTVSGSQGVKFRWYLSAAERGDASSQARIAEMYLEGDGVKKDAQQAEQWLLEAAQNDYAPAQCSLYE
FYSNGVGGEKDPGLALSWLHRAADGDYVRALTTLAVLNYRGEGVTQDKAEAARLYTRAAAQGDVNAAYSLGVMYYHGDGV
GQDYCKAARLFDFTARRGDSAAQGLLGFLYDNGWCVPRDKFAAAMWYLAAARGGNGQAQYNIAVMYLNGELGRTDRNMGL
EFMEKAAANGVPEAREALVKLK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=194, Percent_Identity=28.8659793814433, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87081769, Length=269, Percent_Identity=30.4832713754647, Blast_Score=98, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17563256, Length=247, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6319410, Length=256, Percent_Identity=31.25, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355295, Length=304, Percent_Identity=26.6447368421053, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 36999; Mature: 36999

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGGAAWGLVLPVWLLFLLTFPLYGVSPAAADFEAGVAAYDRGDFEAARREFAADDSPE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHCCCCCHHHHHHHHCCCCCCC
ASFYLGRIFDLGQGGPRDPDLAARYYGIARGGGFTVSGSQGVKFRWYLSAAERGDASSQA
CCEEHHHHHCCCCCCCCCHHHHHHHHEEECCCCEEEECCCCCEEEEEEECCCCCCCCHHH
RIAEMYLEGDGVKKDAQQAEQWLLEAAQNDYAPAQCSLYEFYSNGVGGEKDPGLALSWLH
HHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
RAADGDYVRALTTLAVLNYRGEGVTQDKAEAARLYTRAAAQGDVNAAYSLGVMYYHGDGV
HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCC
GQDYCKAARLFDFTARRGDSAAQGLLGFLYDNGWCVPRDKFAAAMWYLAAARGGNGQAQY
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
NIAVMYLNGELGRTDRNMGLEFMEKAAANGVPEAREALVKLK
EEEEEEECCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MRSGGAAWGLVLPVWLLFLLTFPLYGVSPAAADFEAGVAAYDRGDFEAARREFAADDSPE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHCCCCCHHHHHHHHCCCCCCC
ASFYLGRIFDLGQGGPRDPDLAARYYGIARGGGFTVSGSQGVKFRWYLSAAERGDASSQA
CCEEHHHHHCCCCCCCCCHHHHHHHHEEECCCCEEEECCCCCEEEEEEECCCCCCCCHHH
RIAEMYLEGDGVKKDAQQAEQWLLEAAQNDYAPAQCSLYEFYSNGVGGEKDPGLALSWLH
HHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
RAADGDYVRALTTLAVLNYRGEGVTQDKAEAARLYTRAAAQGDVNAAYSLGVMYYHGDGV
HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCC
GQDYCKAARLFDFTARRGDSAAQGLLGFLYDNGWCVPRDKFAAAMWYLAAARGGNGQAQY
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
NIAVMYLNGELGRTDRNMGLEFMEKAAANGVPEAREALVKLK
EEEEEEECCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]