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The map label for this gene is ybeQ [H]

Identifier: 197117496

GI number: 197117496

Start: 1279561

End: 1280373

Strand: Direct

Name: ybeQ [H]

Synonym: Gbem_1107

Alternate gene names: 197117496

Gene position: 1279561-1280373 (Clockwise)

Preceding gene: 197117494

Following gene: 197117497

Centisome position: 27.73

GC content: 60.52

Gene sequence:

>813_bases
ATGAAAAGACGATTACCGGCAATCATCATCGCATTATTGGTCTGCTGGAGCGGCTCGTGCTACGCGGATTTTCAGGAGGC
CGAGAGGGCATTCGACAAGGGTGATTACCCCTCCGCTCTCGCCTTATACCGGGCCGATAAGACACCAGAGTCGTTTAACA
AACTAGGCGTGCTTTACTACAATGGCCTCGGCGTCGGCAGGAATGTCAGTGAGGCGCTGCATTGGTTTCGCCGGGCGGCG
GATCTGGGGAGTGCGGAAGCCCAGGCCAATCTCGGCCAACTGTACGAAACCGGCGATGGCGTCACCATGGACCTTGCGGA
AGCTATGAAGTGGTACGGCAAAGCTGCCGCTGGCGGGGACCCCGACGCCCAGCACGATTTTGACCGTCTGCGCGCGGAGA
GTGAGCCGAGAAGGATCCGCTGGTACCGCAGGGATGCCCTACTCGGTCATGTCACGGCCCAGTATAACCTTGCCGACGCC
TACTATCATGGCGAAGAAGTGCCTCAGGACAAGCGCGAGGCGGCGAAGTGGTACCTGAAGGCTGCGGAGCAGGGGAACGT
TCCGGCGCAGTACATGCTGGGGCTCATGCTGTTGCAAGGAGACGGCGTGCAAAACGCTTCGGCTGAAGGAGTCGCCTGGC
TGCGAAAAGCCGCCTCCTCCGGTCATCGGGAAGCCCAGTACCAGATGGGCCGATGCTTGCTGCAGGGGATTGGAGTGCGA
CGCGACAGTGAGGAGGCCGTCCTGTGGCTGCGAAAAGCCGCGGCACAGGGAGAGCCGACAGCGGTGGCTGCATTGAAAGA
GGTGGGAAAATGA

Upstream 100 bases:

>100_bases
TATCATATAAAGTTTGAATTGTAAAAGTTCCGCTTATGGCGTAAGATTTGGCGCCCGAACCCCTGCGGGGAAGCGTCGGT
AAATAAAACGGGAGCTGCCA

Downstream 100 bases:

>100_bases
GAAGTGGGGGAGCCGCGTGGGGCCTTGTTCTGCCTGTGTGGCTCCTCTTTTTACTCACCTTCCCGCTTTATGGGGTGTCG
CCGGCGGCGGCCGACTTTGA

Product: SEL1 repeat-containing lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKRRLPAIIIALLVCWSGSCYADFQEAERAFDKGDYPSALALYRADKTPESFNKLGVLYYNGLGVGRNVSEALHWFRRAA
DLGSAEAQANLGQLYETGDGVTMDLAEAMKWYGKAAAGGDPDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADA
YYHGEEVPQDKREAAKWYLKAAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLLQGIGVR
RDSEEAVLWLRKAAAQGEPTAVAALKEVGK

Sequences:

>Translated_270_residues
MKRRLPAIIIALLVCWSGSCYADFQEAERAFDKGDYPSALALYRADKTPESFNKLGVLYYNGLGVGRNVSEALHWFRRAA
DLGSAEAQANLGQLYETGDGVTMDLAEAMKWYGKAAAGGDPDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADA
YYHGEEVPQDKREAAKWYLKAAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLLQGIGVR
RDSEEAVLWLRKAAAQGEPTAVAALKEVGK
>Mature_270_residues
MKRRLPAIIIALLVCWSGSCYADFQEAERAFDKGDYPSALALYRADKTPESFNKLGVLYYNGLGVGRNVSEALHWFRRAA
DLGSAEAQANLGQLYETGDGVTMDLAEAMKWYGKAAAGGDPDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADA
YYHGEEVPQDKREAAKWYLKAAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLLQGIGVR
RDSEEAVLWLRKAAAQGEPTAVAALKEVGK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=204, Percent_Identity=27.4509803921569, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI151301150, Length=185, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI33620759, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87081769, Length=211, Percent_Identity=34.5971563981043, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786867, Length=132, Percent_Identity=35.6060606060606, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355295, Length=205, Percent_Identity=30.7317073170732, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 29860; Mature: 29860

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRLPAIIIALLVCWSGSCYADFQEAERAFDKGDYPSALALYRADKTPESFNKLGVLYY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHCEEEEE
NGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEAMKWYGKAAAGGD
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADAYYHGEEVPQDKREAAKWYLK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCHHHHHHHHHHHH
AAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLLQGIGVR
HHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
RDSEEAVLWLRKAAAQGEPTAVAALKEVGK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKRRLPAIIIALLVCWSGSCYADFQEAERAFDKGDYPSALALYRADKTPESFNKLGVLYY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHCEEEEE
NGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEAMKWYGKAAAGGD
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADAYYHGEEVPQDKREAAKWYLK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCHHHHHHHHHHHH
AAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLLQGIGVR
HHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
RDSEEAVLWLRKAAAQGEPTAVAALKEVGK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]