Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117462

Identifier: 197117462

GI number: 197117462

Start: 1245122

End: 1246171

Strand: Direct

Name: 197117462

Synonym: Gbem_1073

Alternate gene names: NA

Gene position: 1245122-1246171 (Clockwise)

Preceding gene: 197117461

Following gene: 197117463

Centisome position: 26.98

GC content: 55.62

Gene sequence:

>1050_bases
ATGCGAAAGGATAAAAAGACCATCTGGATAGACATGGATAATTCGCCGCATGTACCTTTCTTCAGGCCGATCATCGGCGA
ACTCGAGGCACGGGGGTACGAGGTGATGTTGACGGCTCGGGATTGCTTCCAGGTCTGTAAATTGGCCGACTTATACAAGA
TGGATTACCGAAAAGTCGGAGTCCACTACGGCAAGAACAAGATCATGAAGGGGATTGGGCTGCTGCTGAGGTCGGCGCAG
CTTGCTTCATACGTTTTAAAAAGGAGTCCGGACCTTGCACTTTCCCACGGGTCGCGCTCGCAGATGATCCTTTCCTCGGT
GCTGCACATTCCCACCGTGATGATGACAGACTATGAATATGCCAAGAGTATTCCCTTTTTTCGCCCTGACTGGCTGATCA
TTCCGGAGATGATCCCGGACAGCAGTGTGTGCGACCGCCCCGGCAAAATCCTGCGCTACTCCGGGTTGAAGGAGGATGTC
TACGTGCCGGGGTTCCAGCCCGAGCAGGGAGTCCTGGACCAACTGCGCCTTGACCCGACCAAAGTCATCGTTATTGTTCG
CCCTCCTGCCACAGAGGCGCATTATTTCAAGGAGGAAAGCCTGCGACTGTTCGAGGAGGCAATGTCCTGGCTCGGGACAG
TGGAACAGGTGAGCGTCATCCTACTGCCGCGCAACAGCGGGCAGGCGGACTTCGTTACAAGTAAATGGCCGCAACTGCTG
CAGAGCGGGAAGGTGAAAATCCCCGATCAGGTGATCCCCGGGCTCAACCTGATCTGGTACTCGGATCTGGTGATAAGCGG
CGGGGGTACCATGAACCGTGAGGCAGCGGCGTTGGGGGTGCCGGTCTACAGTATCTTCCGAGGAGAAATAGGTTCCATCG
ACAGGCACCTATCCGATACCGGGCGCTTGACCATGATCGGGAGCGCTGAGGAACTGCGGACCAAGGTGGAACTCAAGAAA
AGAAAGCGCTCGCAGGCTTACCAACCGCCGAACCGCCCTGCGTTGAAACAGATTGTCGACATCCTGCACGTCATCCTGAA
CCAGGTTTAA

Upstream 100 bases:

>100_bases
ACTACATTCCGGACTTCATCTACAAAAAGCTTTAACTACTCCGCTGGGCGGCAGGAGCTTCCTGGATGCCCCCATGAGAA
TTACACAGTAAGAGGTCGCA

Downstream 100 bases:

>100_bases
AAGACGGCGCGCCGCCAGGAGACCACTGCTTGGACAGTAAGTCCGTGCGCCGAGAAAAGGCGACATAAGCTGCACCAATC
TTCTTCGCTGTCGCTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRKDKKTIWIDMDNSPHVPFFRPIIGELEARGYEVMLTARDCFQVCKLADLYKMDYRKVGVHYGKNKIMKGIGLLLRSAQ
LASYVLKRSPDLALSHGSRSQMILSSVLHIPTVMMTDYEYAKSIPFFRPDWLIIPEMIPDSSVCDRPGKILRYSGLKEDV
YVPGFQPEQGVLDQLRLDPTKVIVIVRPPATEAHYFKEESLRLFEEAMSWLGTVEQVSVILLPRNSGQADFVTSKWPQLL
QSGKVKIPDQVIPGLNLIWYSDLVISGGGTMNREAAALGVPVYSIFRGEIGSIDRHLSDTGRLTMIGSAEELRTKVELKK
RKRSQAYQPPNRPALKQIVDILHVILNQV

Sequences:

>Translated_349_residues
MRKDKKTIWIDMDNSPHVPFFRPIIGELEARGYEVMLTARDCFQVCKLADLYKMDYRKVGVHYGKNKIMKGIGLLLRSAQ
LASYVLKRSPDLALSHGSRSQMILSSVLHIPTVMMTDYEYAKSIPFFRPDWLIIPEMIPDSSVCDRPGKILRYSGLKEDV
YVPGFQPEQGVLDQLRLDPTKVIVIVRPPATEAHYFKEESLRLFEEAMSWLGTVEQVSVILLPRNSGQADFVTSKWPQLL
QSGKVKIPDQVIPGLNLIWYSDLVISGGGTMNREAAALGVPVYSIFRGEIGSIDRHLSDTGRLTMIGSAEELRTKVELKK
RKRSQAYQPPNRPALKQIVDILHVILNQV
>Mature_349_residues
MRKDKKTIWIDMDNSPHVPFFRPIIGELEARGYEVMLTARDCFQVCKLADLYKMDYRKVGVHYGKNKIMKGIGLLLRSAQ
LASYVLKRSPDLALSHGSRSQMILSSVLHIPTVMMTDYEYAKSIPFFRPDWLIIPEMIPDSSVCDRPGKILRYSGLKEDV
YVPGFQPEQGVLDQLRLDPTKVIVIVRPPATEAHYFKEESLRLFEEAMSWLGTVEQVSVILLPRNSGQADFVTSKWPQLL
QSGKVKIPDQVIPGLNLIWYSDLVISGGGTMNREAAALGVPVYSIFRGEIGSIDRHLSDTGRLTMIGSAEELRTKVELKK
RKRSQAYQPPNRPALKQIVDILHVILNQV

Specific function: Unknown

COG id: COG1817

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007152 [H]

Pfam domain/function: PF04007 DUF354 [H]

EC number: NA

Molecular weight: Translated: 39523; Mature: 39523

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDKKTIWIDMDNSPHVPFFRPIIGELEARGYEVMLTARDCFQVCKLADLYKMDYRKVG
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
VHYGKNKIMKGIGLLLRSAQLASYVLKRSPDLALSHGSRSQMILSSVLHIPTVMMTDYEY
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCEEECHHH
AKSIPFFRPDWLIIPEMIPDSSVCDRPGKILRYSGLKEDVYVPGFQPEQGVLDQLRLDPT
HHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCE
KVIVIVRPPATEAHYFKEESLRLFEEAMSWLGTVEQVSVILLPRNSGQADFVTSKWPQLL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHH
QSGKVKIPDQVIPGLNLIWYSDLVISGGGTMNREAAALGVPVYSIFRGEIGSIDRHLSDT
HCCCCCCCHHHCCCCEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHCCC
GRLTMIGSAEELRTKVELKKRKRSQAYQPPNRPALKQIVDILHVILNQV
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKDKKTIWIDMDNSPHVPFFRPIIGELEARGYEVMLTARDCFQVCKLADLYKMDYRKVG
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
VHYGKNKIMKGIGLLLRSAQLASYVLKRSPDLALSHGSRSQMILSSVLHIPTVMMTDYEY
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCEEECHHH
AKSIPFFRPDWLIIPEMIPDSSVCDRPGKILRYSGLKEDVYVPGFQPEQGVLDQLRLDPT
HHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCE
KVIVIVRPPATEAHYFKEESLRLFEEAMSWLGTVEQVSVILLPRNSGQADFVTSKWPQLL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHH
QSGKVKIPDQVIPGLNLIWYSDLVISGGGTMNREAAALGVPVYSIFRGEIGSIDRHLSDT
HCCCCCCCHHHCCCCEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHCCC
GRLTMIGSAEELRTKVELKKRKRSQAYQPPNRPALKQIVDILHVILNQV
CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]