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The map label for this gene is 197117442

Identifier: 197117442

GI number: 197117442

Start: 1225424

End: 1226332

Strand: Reverse

Name: 197117442

Synonym: Gbem_1053

Alternate gene names: NA

Gene position: 1226332-1225424 (Counterclockwise)

Preceding gene: 197117443

Following gene: 197117441

Centisome position: 26.57

GC content: 61.06

Gene sequence:

>909_bases
ATGCTCTACCTGGTCGTTTTCTCGGTGTTCGCGTCGGTCCTGCTCGTGTCGGCGATCCTTTGCCACTACGCCTTCTTCAG
CAAGAGCGCCGTGGCCCAAAGGTTGGAAGAATTCTTCCCTCGCCCCCAAAGCGCCAAGACAGGCATGGTGCCGTCGGGAA
CCTGGGCCTACAAGCTCGCGAAGATCGGCGAGAAGGTGAAGCTCCCCCAAAAGGAGGAGTCGAAGTACGTGAAAGCCCTC
GTTGCCGCCGGCTTTCGCAAGGATGCCGTCTACCGCTTCCTCGGGGCCAAGCTCCTACTGGCTGGGGTGCTCCCCCTAAT
CTGCCTCCTCGCGGTCGCGACTACGAGCCGTACCTTCTTCACCACCCAGACCCTCCTGGCGACGGCCTTCTTCAGCATCA
TCGGCTACCTCGCTCCCACCTATTGGCTCCACCTTAAGGTGAAGGCGCGCCAGTTAGAGATCTTTCACCCCCTGCCGGAC
ATCCTCGACCTGGTCACCCTCTGTGTCGAGGCGGGGCTCAGCATCGATGCGGCGTTGATTCGAACCACCGAGACCCCGCA
ATTCCGGGACAACCCACTGGCGATCGAGATCAGGCAGGTGACAATGGAGGTCAGGGCAGGCAAGCCGCGCGTGGAGTCGT
TGAAGGACATGGCGGTGCGCACCAGGGTCGAGGACATCGGCTCCTTCACCACCATGGTCGCCCAGGCCGAGCGTTTCGGG
ACCAGCCTAAGCCATGCCCTGCGCACCTTCTCCGACGAACTCAGGACCAAGAGAAGGCAGATGGCAGAGGAGGCCGCCGC
GAAGACCACCATCAAGCTGATCTTCCCACTGATCATGTTCATCTTCCCCGCACTGCTCGTGGTCATTCTCGGACCGGCGG
TGGTCAAGTTGGGCAAGATTTTCCAGTAA

Upstream 100 bases:

>100_bases
ACCGCTGGGGCTGTATGTCCTGGCCGGCGCCGCCGCCATGCAGATAATCGGGTTTCTCGTGATACGCAAGATCGTCAGAA
TCAGGATATAGGTGGCTGCC

Downstream 100 bases:

>100_bases
GGCGCGGGAACCGTAGGCCCAGGAGCTAAATCGAACAGCCAAGGAGGTGATCCCATGAAAATCGACTTCAACACTTTCAT
ACTGCTCATCATTTCCGTCC

Product: Flp pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein; TadC Protein; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLYLVVFSVFASVLLVSAILCHYAFFSKSAVAQRLEEFFPRPQSAKTGMVPSGTWAYKLAKIGEKVKLPQKEESKYVKAL
VAAGFRKDAVYRFLGAKLLLAGVLPLICLLAVATTSRTFFTTQTLLATAFFSIIGYLAPTYWLHLKVKARQLEIFHPLPD
ILDLVTLCVEAGLSIDAALIRTTETPQFRDNPLAIEIRQVTMEVRAGKPRVESLKDMAVRTRVEDIGSFTTMVAQAERFG
TSLSHALRTFSDELRTKRRQMAEEAAAKTTIKLIFPLIMFIFPALLVVILGPAVVKLGKIFQ

Sequences:

>Translated_302_residues
MLYLVVFSVFASVLLVSAILCHYAFFSKSAVAQRLEEFFPRPQSAKTGMVPSGTWAYKLAKIGEKVKLPQKEESKYVKAL
VAAGFRKDAVYRFLGAKLLLAGVLPLICLLAVATTSRTFFTTQTLLATAFFSIIGYLAPTYWLHLKVKARQLEIFHPLPD
ILDLVTLCVEAGLSIDAALIRTTETPQFRDNPLAIEIRQVTMEVRAGKPRVESLKDMAVRTRVEDIGSFTTMVAQAERFG
TSLSHALRTFSDELRTKRRQMAEEAAAKTTIKLIFPLIMFIFPALLVVILGPAVVKLGKIFQ
>Mature_302_residues
MLYLVVFSVFASVLLVSAILCHYAFFSKSAVAQRLEEFFPRPQSAKTGMVPSGTWAYKLAKIGEKVKLPQKEESKYVKAL
VAAGFRKDAVYRFLGAKLLLAGVLPLICLLAVATTSRTFFTTQTLLATAFFSIIGYLAPTYWLHLKVKARQLEIFHPLPD
ILDLVTLCVEAGLSIDAALIRTTETPQFRDNPLAIEIRQVTMEVRAGKPRVESLKDMAVRTRVEDIGSFTTMVAQAERFG
TSLSHALRTFSDELRTKRRQMAEEAAAKTTIKLIFPLIMFIFPALLVVILGPAVVKLGKIFQ

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33605; Mature: 33605

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLVVFSVFASVLLVSAILCHYAFFSKSAVAQRLEEFFPRPQSAKTGMVPSGTWAYKLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
KIGEKVKLPQKEESKYVKALVAAGFRKDAVYRFLGAKLLLAGVLPLICLLAVATTSRTFF
HHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TTQTLLATAFFSIIGYLAPTYWLHLKVKARQLEIFHPLPDILDLVTLCVEAGLSIDAALI
HHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
RTTETPQFRDNPLAIEIRQVTMEVRAGKPRVESLKDMAVRTRVEDIGSFTTMVAQAERFG
CCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLSHALRTFSDELRTKRRQMAEEAAAKTTIKLIFPLIMFIFPALLVVILGPAVVKLGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQ
CC
>Mature Secondary Structure
MLYLVVFSVFASVLLVSAILCHYAFFSKSAVAQRLEEFFPRPQSAKTGMVPSGTWAYKLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
KIGEKVKLPQKEESKYVKALVAAGFRKDAVYRFLGAKLLLAGVLPLICLLAVATTSRTFF
HHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TTQTLLATAFFSIIGYLAPTYWLHLKVKARQLEIFHPLPDILDLVTLCVEAGLSIDAALI
HHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
RTTETPQFRDNPLAIEIRQVTMEVRAGKPRVESLKDMAVRTRVEDIGSFTTMVAQAERFG
CCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLSHALRTFSDELRTKRRQMAEEAAAKTTIKLIFPLIMFIFPALLVVILGPAVVKLGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA