Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117441

Identifier: 197117441

GI number: 197117441

Start: 1224860

End: 1225201

Strand: Reverse

Name: 197117441

Synonym: Gbem_1052

Alternate gene names: NA

Gene position: 1225201-1224860 (Counterclockwise)

Preceding gene: 197117442

Following gene: 197117440

Centisome position: 26.55

GC content: 66.96

Gene sequence:

>342_bases
ATGAGGGCGATCAACAAGAGCACCGGCCGCACCCTGGCCGGCAGGGTCGTCGCGGCGGAGACGCTGCTTTCGCGCAGCAG
AGGGCTTTTGGAGCGCGACGAGCTGCCGATGGGGGAAGGGCTCCTGATCCGCCCCTGCCGCGGCGTGCACACCTTCTTCA
TGAGATTCCCGATCGATGTTGTATTCCTGGACCGCTCGCAGCGCGTGGTCGCGACGGTGGGGCAGCTGAAACCGGGGCGG
ATGACCCGGATCTTCCCGAAAGCGTGGAGCGCCCTGGAGCTTCCGGCAGGTACCATCGCCCTTTCCCGGACCAGTTGCGG
CGACGAGGTGGACGTCGGCTGA

Upstream 100 bases:

>100_bases
ACAGGCCAAGAAGAAGTGATCCCCCACCCCTTGCCGGCGCTTTTGCCTGGCCGGCAAGGGCAATCCCGCGCAGGATTTCT
GGCAGTTCCCGGAGGCCCGG

Downstream 100 bases:

>100_bases
GGTTAACCGCGTCACGGGCGATCTTCCCATGCGACCTGCTGCGCCCCCCCGCCCACGGTAAAGACAAAGGACCCAGCTGA
CATGGAAAGAAAGCCCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRAINKSTGRTLAGRVVAAETLLSRSRGLLERDELPMGEGLLIRPCRGVHTFFMRFPIDVVFLDRSQRVVATVGQLKPGR
MTRIFPKAWSALELPAGTIALSRTSCGDEVDVG

Sequences:

>Translated_113_residues
MRAINKSTGRTLAGRVVAAETLLSRSRGLLERDELPMGEGLLIRPCRGVHTFFMRFPIDVVFLDRSQRVVATVGQLKPGR
MTRIFPKAWSALELPAGTIALSRTSCGDEVDVG
>Mature_113_residues
MRAINKSTGRTLAGRVVAAETLLSRSRGLLERDELPMGEGLLIRPCRGVHTFFMRFPIDVVFLDRSQRVVATVGQLKPGR
MTRIFPKAWSALELPAGTIALSRTSCGDEVDVG

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12397; Mature: 12397

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAINKSTGRTLAGRVVAAETLLSRSRGLLERDELPMGEGLLIRPCRGVHTFFMRFPIDV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE
VFLDRSQRVVATVGQLKPGRMTRIFPKAWSALELPAGTIALSRTSCGDEVDVG
EEECCCCEEEEHHCCCCCCCEEEECCCCCCEECCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRAINKSTGRTLAGRVVAAETLLSRSRGLLERDELPMGEGLLIRPCRGVHTFFMRFPIDV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE
VFLDRSQRVVATVGQLKPGRMTRIFPKAWSALELPAGTIALSRTSCGDEVDVG
EEECCCCEEEEHHCCCCCCCEEEECCCCCCEECCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA