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The map label for this gene is 197117443

Identifier: 197117443

GI number: 197117443

Start: 1226342

End: 1227304

Strand: Reverse

Name: 197117443

Synonym: Gbem_1054

Alternate gene names: NA

Gene position: 1227304-1226342 (Counterclockwise)

Preceding gene: 197117444

Following gene: 197117442

Centisome position: 26.59

GC content: 62.51

Gene sequence:

>963_bases
ATGCTTTATCCCATCGTGGCGCTTATATTCCTGGCGGCCTTCGGCGTCTTCCTGGCGGCCTTTCTCTACCTCGCGCAACG
GCAGACGTCCGGCAGGACGGTGCTGAAAAGACGGCTGCAGACCATGGCAGGCGAGAGGCAGGGGGAGATCCCGGAGGAGT
TCCTTTCGGTGATCAGCAGGGAAGCGGAACGAGCCTCGGAGCTCCTCACCCGGGCGCCTCAGATGCGCACCCTGGGGAAG
CGTCTGGAGCAGGCGGGCATCCAGCTTTCCGCCTCATTGCTTCTTGGATCCACCATGGCGGCGGCGCTCGGTCTGGCCAT
CCTCTTGGGGTTGAAGACGCAATCTCCCCTGGTCGGGTTCCTCGCCGCGGTGGTCGTACTGCTCGTCGCTGAACTGATGC
TCCGGGTGAAGACGGAGCGACGCAGCATCAAGTTCACCGAGCAGTTTCCCGACGCCCTGAGCATCGCCGCCCGTTCGCTG
AGGGCCGGGCATTCCTTCCCGACCGCCATCCAACTGGTCGGGCAGGAGGTCCCCTCCCCGGTAGGCCCCTTGTTCAAGAC
AGCCTACGAGCAACAGCAACTGGGTCTCAGGATGGTGGACGCCCTGATGAGGATGAACGAGAGGATCGACAGCCTCGACC
TCAGGTTCTTCACCACCCTGGTCGCCATCAACAGCGACATAGGCGGGAACCTCTCCGAGCTTTTGGACAAGCTGGCGATG
ACCATCAGGGAGCGGCTCAAGATACGGCGCCAGGTACAGGTCTACACGGCACAGGGGCGGCTCTCCGGCTACGTGCTGGC
GGCGCTCCCTATAGCCACCTTCGGCATCTTCAGCGTGTTGAACCCAAACTACGAGCGGGCACTCATCCGCGAACCGCTGG
GGCTGTATGTCCTGGCCGGCGCCGCCGCCATGCAGATAATCGGGTTTCTCGTGATACGCAAGATCGTCAGAATCAGGATA
TAG

Upstream 100 bases:

>100_bases
CGAATTCCGCGCCACCGGGGTGAGGCCGCGCTTTGCCGAGCGCTTCAAGCTCTACGGGTTCGAGCTCCCCGCCATCATGT
TCGAGAACTAGGAGCCCCGC

Downstream 100 bases:

>100_bases
GTGGCTGCCATGCTCTACCTGGTCGTTTTCTCGGTGTTCGCGTCGGTCCTGCTCGTGTCGGCGATCCTTTGCCACTACGC
CTTCTTCAGCAAGAGCGCCG

Product: Flp pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLYPIVALIFLAAFGVFLAAFLYLAQRQTSGRTVLKRRLQTMAGERQGEIPEEFLSVISREAERASELLTRAPQMRTLGK
RLEQAGIQLSASLLLGSTMAAALGLAILLGLKTQSPLVGFLAAVVVLLVAELMLRVKTERRSIKFTEQFPDALSIAARSL
RAGHSFPTAIQLVGQEVPSPVGPLFKTAYEQQQLGLRMVDALMRMNERIDSLDLRFFTTLVAINSDIGGNLSELLDKLAM
TIRERLKIRRQVQVYTAQGRLSGYVLAALPIATFGIFSVLNPNYERALIREPLGLYVLAGAAAMQIIGFLVIRKIVRIRI

Sequences:

>Translated_320_residues
MLYPIVALIFLAAFGVFLAAFLYLAQRQTSGRTVLKRRLQTMAGERQGEIPEEFLSVISREAERASELLTRAPQMRTLGK
RLEQAGIQLSASLLLGSTMAAALGLAILLGLKTQSPLVGFLAAVVVLLVAELMLRVKTERRSIKFTEQFPDALSIAARSL
RAGHSFPTAIQLVGQEVPSPVGPLFKTAYEQQQLGLRMVDALMRMNERIDSLDLRFFTTLVAINSDIGGNLSELLDKLAM
TIRERLKIRRQVQVYTAQGRLSGYVLAALPIATFGIFSVLNPNYERALIREPLGLYVLAGAAAMQIIGFLVIRKIVRIRI
>Mature_320_residues
MLYPIVALIFLAAFGVFLAAFLYLAQRQTSGRTVLKRRLQTMAGERQGEIPEEFLSVISREAERASELLTRAPQMRTLGK
RLEQAGIQLSASLLLGSTMAAALGLAILLGLKTQSPLVGFLAAVVVLLVAELMLRVKTERRSIKFTEQFPDALSIAARSL
RAGHSFPTAIQLVGQEVPSPVGPLFKTAYEQQQLGLRMVDALMRMNERIDSLDLRFFTTLVAINSDIGGNLSELLDKLAM
TIRERLKIRRQVQVYTAQGRLSGYVLAALPIATFGIFSVLNPNYERALIREPLGLYVLAGAAAMQIIGFLVIRKIVRIRI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35296; Mature: 35296

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPIVALIFLAAFGVFLAAFLYLAQRQTSGRTVLKRRLQTMAGERQGEIPEEFLSVISR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EAERASELLTRAPQMRTLGKRLEQAGIQLSASLLLGSTMAAALGLAILLGLKTQSPLVGF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LAAVVVLLVAELMLRVKTERRSIKFTEQFPDALSIAARSLRAGHSFPTAIQLVGQEVPSP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
VGPLFKTAYEQQQLGLRMVDALMRMNERIDSLDLRFFTTLVAINSDIGGNLSELLDKLAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TIRERLKIRRQVQVYTAQGRLSGYVLAALPIATFGIFSVLNPNYERALIREPLGLYVLAG
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
AAAMQIIGFLVIRKIVRIRI
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYPIVALIFLAAFGVFLAAFLYLAQRQTSGRTVLKRRLQTMAGERQGEIPEEFLSVISR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EAERASELLTRAPQMRTLGKRLEQAGIQLSASLLLGSTMAAALGLAILLGLKTQSPLVGF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LAAVVVLLVAELMLRVKTERRSIKFTEQFPDALSIAARSLRAGHSFPTAIQLVGQEVPSP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
VGPLFKTAYEQQQLGLRMVDALMRMNERIDSLDLRFFTTLVAINSDIGGNLSELLDKLAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TIRERLKIRRQVQVYTAQGRLSGYVLAALPIATFGIFSVLNPNYERALIREPLGLYVLAG
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
AAAMQIIGFLVIRKIVRIRI
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA