Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yqfF [H]

Identifier: 197117387

GI number: 197117387

Start: 1154014

End: 1156383

Strand: Direct

Name: yqfF [H]

Synonym: Gbem_0997

Alternate gene names: 197117387

Gene position: 1154014-1156383 (Clockwise)

Preceding gene: 197117384

Following gene: 308535206

Centisome position: 25.0

GC content: 62.57

Gene sequence:

>2370_bases
ATGCCCACCGAAAGCGGCGACAAAAAACAGAAGAGCTCACTCATCCGGCTCTGTGACAGCTGGTTGGAAGCAGTTGCCCA
AGGCTTCTCCTGTGACAAGTATGAAAAGCGCAGCCGCTTTATCATGCTCTTCCTCACAGCTTTATTCCTCACCCTGCTCA
TCATCCCGAGTCCGCAGTTCCTCACGGTCAACTACCGCGAAGGCGACATCGCTACTTCGGATATCCGCGCCACCCAGGAT
TACCTCATCGAGGATCTCCTGCTCACCGAGAAAAAGCGCGCCGAGGCCGAGGCCGTGGCCCCGTTTATCTACAGTCTCGC
CCAAAACGGAAACATAGACCTGGTGCGCCGCTTCGAGGAGGCGCTGGAACTCATGCGCGACTCCGGGCAGGGGGAGGCGC
GCCGCAACGCCATCGCCGGCGTCCTGGGGGTCGACATCTCGACACAGGAGTTCGGGGCGCTGTCGCGGATCAGGCAGGAG
CGGGCCTTTCTCTCCGATCTGGGAAGGCAGCTCGCCCCCGTTTACCGTCATCGCATCGTCGCCGACCGCTCCAATTTCGC
CGCCGATCTGCGCCACGGCATCGTGGTCCTGGACGAGACCACAAGGCAGGAAGTGGCGGGTGGGGACTACTCCTCCAGCA
TCGACCTCCCAGCGGCCAGGCGCGCCTTTCGCGGCGTCTACCTGACCCAGGGCGCCTCGGCGCATGACCTCGAGATTCTC
AAGGGGGTGGCGCAGCGGATGATCGCCCCCAACCTGAGCTTCGACCGCAACTTAACCGACGACAAGAAAAGCGAGGCGCG
CGCCGCGGTGCGCCCGGTCCTTTTCAAGATGAAGCGCGGCGAGATGATCGTCCGGGTCGGGGAGCGGGTCACCTCCGAAC
AGGCGATGAAGCTGGAGAAGATCTACAAGGCGAAGAACCGCGCCCCGGTCCTCACCGGGCTCGGCATCTTCGGGCTGGTC
GTCGTGCTCTGCTACGTCCCGTTTCGCTTCGGCCGCAAGAACATCCGCAAGTTCAGCCCGAGCAACAAGGACATCCTGCT
TTTGTCGCTCTTGACGGTGGGGAACTTCGCGGTGCTGAAGCTGGTCTCCGCCGTTTCCACCGCCATGGGGGGACTCTTCC
CCAGCATCGACACCGCGAGCTACTTCTACGTCTTCCCCTTTGCCGCCAGCGCCATCATCGTCAGGATCATCCTCAACTCC
GAGGTAGCGCTGGTTTACTGCGCCGTCACCGCCCCCCTCACCGGCATCATGCTGAACAACTCGCTGCTGGTGGTGATCTA
CGCCCTCTTGGGGGGGATCGTGGGAGCCCACGGCGTGCGCCAGTGCAAGGAGCGCGGGACCATCTACAGCGCCGGTTTCA
AGGTGAGCGTGGTCAACATGGCGCTAGCCGTCTGCTTCTACGTCTACAGCGACAGCCATTTCTCGCTGCAGACCGTTTAC
TGCGTAGCCTTCGCCCTTCTGGGGGGCCTCATCAACGCGGTCTTCGCCTCGGGAACCATCCCGCTCATCGAGGCGCTCTT
CCAGTACACGACGGACGTGAAGCTCCTCGAACTCGCCAACCTCAATTCGCCGCTTTTGCGCGAGCTGATGATCCGCGCCC
CCGGGACCTACCACCATAGCGTGCTCGTGGGGAACATGGTGGAGGCGGGAGCCGAGGCGATCAACGCGAACCCGCTCCTG
GCCCGCGTAGCCGCCTACTACCACGACGTCGGCAAGCTCAAGAAGCCGCAGTACTTCATCGAGAACATCCGCGACGGCGA
GAACCGCCACGACAAGCTCTCACCGAGCATGAGCGCGCTGATCCTCATCTCGCACATGAAGGAAGGGGTGGAACTCGCCA
AGGAGCACCGGGTAGGGCAGCCGATCATCGAGATCATCCGCCAGTCCCACGGCACCTCCCTGATCAGCTACTTCTACCTG
AAGGCGAAGGGACTGGAGACCCCGGGCGCGCCGCCGGTTGAGGAGCGGGACTTCCGCTACCCCGGCCCCAAGCCGCAGAC
CAGGGAAGCCGGCCTCGTGCTCCTGGCGGACTGCGTAGAGGCCGCCTCGCGCACCCTCACCGACCCGACCCCCGCCAGGA
TCCAGGGGATGGTGCAGAAGATCATCAACAACATCTTCATCGACGGGCAGCTCGACGAGTGCGAACTGACGCTCAAGAAC
CTGCACGAGATAGCGAAGAGTTTCAACCAGATACTTGCCGGGATCTACCACCAGCGCATAGACTACCCGGAGCCGGCCTA
CAAGGAGAAGAACATTGTCAAGAAGTGCCCAGAGGATTGCGATAGCGAACCGCCAAAGGCGGATCCCGGTCGGGACGACG
GCGTTGCGAAAGGTGGCGCAGAGGATCTTAGACGCCTTGGGATGTCCTGA

Upstream 100 bases:

>100_bases
TTTTGGTTTAGATTGACAGTAATCCGGCATTAGATATATATTGTCCCCTTGCGTGCCAACCTGCAGCCTCTGTCCTCATG
ACACGGGAACTATAGATATA

Downstream 100 bases:

>100_bases
GGCCGAACTCTCCATCAGCATCGTCGGCGACCGCGCCATCAGGGTCATCAACCGCGATTACCTGGGGCGGGACAAGGCAA
CCAACGTGATTTCGTTCGCC

Product: membrane-associated metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MPTESGDKKQKSSLIRLCDSWLEAVAQGFSCDKYEKRSRFIMLFLTALFLTLLIIPSPQFLTVNYREGDIATSDIRATQD
YLIEDLLLTEKKRAEAEAVAPFIYSLAQNGNIDLVRRFEEALELMRDSGQGEARRNAIAGVLGVDISTQEFGALSRIRQE
RAFLSDLGRQLAPVYRHRIVADRSNFAADLRHGIVVLDETTRQEVAGGDYSSSIDLPAARRAFRGVYLTQGASAHDLEIL
KGVAQRMIAPNLSFDRNLTDDKKSEARAAVRPVLFKMKRGEMIVRVGERVTSEQAMKLEKIYKAKNRAPVLTGLGIFGLV
VVLCYVPFRFGRKNIRKFSPSNKDILLLSLLTVGNFAVLKLVSAVSTAMGGLFPSIDTASYFYVFPFAASAIIVRIILNS
EVALVYCAVTAPLTGIMLNNSLLVVIYALLGGIVGAHGVRQCKERGTIYSAGFKVSVVNMALAVCFYVYSDSHFSLQTVY
CVAFALLGGLINAVFASGTIPLIEALFQYTTDVKLLELANLNSPLLRELMIRAPGTYHHSVLVGNMVEAGAEAINANPLL
ARVAAYYHDVGKLKKPQYFIENIRDGENRHDKLSPSMSALILISHMKEGVELAKEHRVGQPIIEIIRQSHGTSLISYFYL
KAKGLETPGAPPVEERDFRYPGPKPQTREAGLVLLADCVEAASRTLTDPTPARIQGMVQKIINNIFIDGQLDECELTLKN
LHEIAKSFNQILAGIYHQRIDYPEPAYKEKNIVKKCPEDCDSEPPKADPGRDDGVAKGGAEDLRRLGMS

Sequences:

>Translated_789_residues
MPTESGDKKQKSSLIRLCDSWLEAVAQGFSCDKYEKRSRFIMLFLTALFLTLLIIPSPQFLTVNYREGDIATSDIRATQD
YLIEDLLLTEKKRAEAEAVAPFIYSLAQNGNIDLVRRFEEALELMRDSGQGEARRNAIAGVLGVDISTQEFGALSRIRQE
RAFLSDLGRQLAPVYRHRIVADRSNFAADLRHGIVVLDETTRQEVAGGDYSSSIDLPAARRAFRGVYLTQGASAHDLEIL
KGVAQRMIAPNLSFDRNLTDDKKSEARAAVRPVLFKMKRGEMIVRVGERVTSEQAMKLEKIYKAKNRAPVLTGLGIFGLV
VVLCYVPFRFGRKNIRKFSPSNKDILLLSLLTVGNFAVLKLVSAVSTAMGGLFPSIDTASYFYVFPFAASAIIVRIILNS
EVALVYCAVTAPLTGIMLNNSLLVVIYALLGGIVGAHGVRQCKERGTIYSAGFKVSVVNMALAVCFYVYSDSHFSLQTVY
CVAFALLGGLINAVFASGTIPLIEALFQYTTDVKLLELANLNSPLLRELMIRAPGTYHHSVLVGNMVEAGAEAINANPLL
ARVAAYYHDVGKLKKPQYFIENIRDGENRHDKLSPSMSALILISHMKEGVELAKEHRVGQPIIEIIRQSHGTSLISYFYL
KAKGLETPGAPPVEERDFRYPGPKPQTREAGLVLLADCVEAASRTLTDPTPARIQGMVQKIINNIFIDGQLDECELTLKN
LHEIAKSFNQILAGIYHQRIDYPEPAYKEKNIVKKCPEDCDSEPPKADPGRDDGVAKGGAEDLRRLGMS
>Mature_788_residues
PTESGDKKQKSSLIRLCDSWLEAVAQGFSCDKYEKRSRFIMLFLTALFLTLLIIPSPQFLTVNYREGDIATSDIRATQDY
LIEDLLLTEKKRAEAEAVAPFIYSLAQNGNIDLVRRFEEALELMRDSGQGEARRNAIAGVLGVDISTQEFGALSRIRQER
AFLSDLGRQLAPVYRHRIVADRSNFAADLRHGIVVLDETTRQEVAGGDYSSSIDLPAARRAFRGVYLTQGASAHDLEILK
GVAQRMIAPNLSFDRNLTDDKKSEARAAVRPVLFKMKRGEMIVRVGERVTSEQAMKLEKIYKAKNRAPVLTGLGIFGLVV
VLCYVPFRFGRKNIRKFSPSNKDILLLSLLTVGNFAVLKLVSAVSTAMGGLFPSIDTASYFYVFPFAASAIIVRIILNSE
VALVYCAVTAPLTGIMLNNSLLVVIYALLGGIVGAHGVRQCKERGTIYSAGFKVSVVNMALAVCFYVYSDSHFSLQTVYC
VAFALLGGLINAVFASGTIPLIEALFQYTTDVKLLELANLNSPLLRELMIRAPGTYHHSVLVGNMVEAGAEAINANPLLA
RVAAYYHDVGKLKKPQYFIENIRDGENRHDKLSPSMSALILISHMKEGVELAKEHRVGQPIIEIIRQSHGTSLISYFYLK
AKGLETPGAPPVEERDFRYPGPKPQTREAGLVLLADCVEAASRTLTDPTPARIQGMVQKIINNIFIDGQLDECELTLKNL
HEIAKSFNQILAGIYHQRIDYPEPAYKEKNIVKKCPEDCDSEPPKADPGRDDGVAKGGAEDLRRLGMS

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 87117; Mature: 86986

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTESGDKKQKSSLIRLCDSWLEAVAQGFSCDKYEKRSRFIMLFLTALFLTLLIIPSPQF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LTVNYREGDIATSDIRATQDYLIEDLLLTEKKRAEAEAVAPFIYSLAQNGNIDLVRRFEE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALELMRDSGQGEARRNAIAGVLGVDISTQEFGALSRIRQERAFLSDLGRQLAPVYRHRIV
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRSNFAADLRHGIVVLDETTRQEVAGGDYSSSIDLPAARRAFRGVYLTQGASAHDLEIL
HCCHHHHHHHHCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCCCCHHHHHH
KGVAQRMIAPNLSFDRNLTDDKKSEARAAVRPVLFKMKRGEMIVRVGERVTSEQAMKLEK
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IYKAKNRAPVLTGLGIFGLVVVLCYVPFRFGRKNIRKFSPSNKDILLLSLLTVGNFAVLK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEHHHHHCHHHHHH
LVSAVSTAMGGLFPSIDTASYFYVFPFAASAIIVRIILNSEVALVYCAVTAPLTGIMLNN
HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHHCCC
SLLVVIYALLGGIVGAHGVRQCKERGTIYSAGFKVSVVNMALAVCFYVYSDSHFSLQTVY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
CVAFALLGGLINAVFASGTIPLIEALFQYTTDVKLLELANLNSPLLRELMIRAPGTYHHS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCHH
VLVGNMVEAGAEAINANPLLARVAAYYHDVGKLKKPQYFIENIRDGENRHDKLSPSMSAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCHHHHH
ILISHMKEGVELAKEHRVGQPIIEIIRQSHGTSLISYFYLKAKGLETPGAPPVEERDFRY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PGPKPQTREAGLVLLADCVEAASRTLTDPTPARIQGMVQKIINNIFIDGQLDECELTLKN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LHEIAKSFNQILAGIYHQRIDYPEPAYKEKNIVKKCPEDCDSEPPKADPGRDDGVAKGGA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCH
EDLRRLGMS
HHHHHCCCC
>Mature Secondary Structure 
PTESGDKKQKSSLIRLCDSWLEAVAQGFSCDKYEKRSRFIMLFLTALFLTLLIIPSPQF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LTVNYREGDIATSDIRATQDYLIEDLLLTEKKRAEAEAVAPFIYSLAQNGNIDLVRRFEE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALELMRDSGQGEARRNAIAGVLGVDISTQEFGALSRIRQERAFLSDLGRQLAPVYRHRIV
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRSNFAADLRHGIVVLDETTRQEVAGGDYSSSIDLPAARRAFRGVYLTQGASAHDLEIL
HCCHHHHHHHHCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCCCCHHHHHH
KGVAQRMIAPNLSFDRNLTDDKKSEARAAVRPVLFKMKRGEMIVRVGERVTSEQAMKLEK
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IYKAKNRAPVLTGLGIFGLVVVLCYVPFRFGRKNIRKFSPSNKDILLLSLLTVGNFAVLK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEHHHHHCHHHHHH
LVSAVSTAMGGLFPSIDTASYFYVFPFAASAIIVRIILNSEVALVYCAVTAPLTGIMLNN
HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHHCCC
SLLVVIYALLGGIVGAHGVRQCKERGTIYSAGFKVSVVNMALAVCFYVYSDSHFSLQTVY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
CVAFALLGGLINAVFASGTIPLIEALFQYTTDVKLLELANLNSPLLRELMIRAPGTYHHS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCHH
VLVGNMVEAGAEAINANPLLARVAAYYHDVGKLKKPQYFIENIRDGENRHDKLSPSMSAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCHHHHH
ILISHMKEGVELAKEHRVGQPIIEIIRQSHGTSLISYFYLKAKGLETPGAPPVEERDFRY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PGPKPQTREAGLVLLADCVEAASRTLTDPTPARIQGMVQKIINNIFIDGQLDECELTLKN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LHEIAKSFNQILAGIYHQRIDYPEPAYKEKNIVKKCPEDCDSEPPKADPGRDDGVAKGGA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCH
EDLRRLGMS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]