| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is adk
Identifier: 197117344
GI number: 197117344
Start: 1108060
End: 1108704
Strand: Direct
Name: adk
Synonym: Gbem_0954
Alternate gene names: 197117344
Gene position: 1108060-1108704 (Clockwise)
Preceding gene: 197117343
Following gene: 308535202
Centisome position: 24.01
GC content: 62.33
Gene sequence:
>645_bases ATGAATCTCATCCTCCTCGGACCCCCGGGCGTCGGCAAGGGGACCCAGGCAAAACTTCTCATAGATAGATTTGGTATCCC GCAGATATCGACAGGTGATATACTGCGGGCTGCCGTTAAAGAGCTGACTCCCATGGGAGCCAAGGCCAAGGGATATATGG ACTCCGGCGCGCTGGTTCCGGACGAAGTCGTGATCGGCATCGTCGAGGAGCGGCTGGCGCAGGCGGACTGCCAGAAGGGA TTCATCCTGGACGGTTTCCCCCGCACGGTACCCCAGGCGGACGCATTGGGTCAGGTCCTCTCCGGCATGGGGAAGTCGAT CGATCATGTGGTCTCGCTTTCGGTGGACAAGGGAGAGCTTCTGAAGCGGCTTACCGGGCGTCGCGCCTGTGCCAATTGCG GCGCCGGCTACCACGTCGACTTCGCCCCCTCCAAAGTGGCAGGCGTCTGCGATGCCTGCTCCGGCCAACTGGTCCAGCGT GAGGACGACAAGGAAGAAACCATCCTGAACCGCCTGGCGGTTTACGAAGCGCAGACCGCGCCTTTGATCGCCTACTATCA GGCGGCAGGGTTGCTCCGCTCCGTCGATGGCCTCGGGACCGTAGAAGGGGTCCAGTCGGGCATCCTCGCGGCGATACGGG CCTAG
Upstream 100 bases:
>100_bases CATGGACACTCTGTCGCAGATAGAGGCGCACCTGATTACCCGAAGCTACGAAGGGTTCATGAAGGGCGTGCGCATCCAGG GCAGAAGGTAAGGGGTTATC
Downstream 100 bases:
>100_bases CGGTGATCGTACTAAAGTCCCCGGCTGAGATCGAGAAGATGGCGGCTGCCGGAAGGATCGTAGCGGAGATCCTGGCCGGG CTCAGGGAAAAAGTGGTGCC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQADCQKG FILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGELLKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQR EDDKEETILNRLAVYEAQTAPLIAYYQAAGLLRSVDGLGTVEGVQSGILAAIRA
Sequences:
>Translated_214_residues MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQADCQKG FILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGELLKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQR EDDKEETILNRLAVYEAQTAPLIAYYQAAGLLRSVDGLGTVEGVQSGILAAIRA >Mature_214_residues MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQADCQKG FILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGELLKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQR EDDKEETILNRLAVYEAQTAPLIAYYQAAGLLRSVDGLGTVEGVQSGILAAIRA
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=209, Percent_Identity=41.1483253588517, Blast_Score=170, Evalue=9e-43, Organism=Homo sapiens, GI4502013, Length=209, Percent_Identity=41.1483253588517, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI19923437, Length=197, Percent_Identity=38.5786802030457, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI310110345, Length=197, Percent_Identity=37.0558375634518, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI53832003, Length=197, Percent_Identity=37.0558375634518, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI8051579, Length=197, Percent_Identity=37.0558375634518, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI53832001, Length=197, Percent_Identity=37.0558375634518, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI4502011, Length=213, Percent_Identity=30.9859154929577, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI22749187, Length=212, Percent_Identity=29.7169811320755, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI28144897, Length=217, Percent_Identity=27.1889400921659, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI28144899, Length=217, Percent_Identity=27.1889400921659, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI1786680, Length=186, Percent_Identity=52.1505376344086, Blast_Score=200, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17552384, Length=205, Percent_Identity=40, Blast_Score=161, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17567503, Length=212, Percent_Identity=32.0754716981132, Blast_Score=106, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17533833, Length=194, Percent_Identity=28.3505154639175, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17537943, Length=188, Percent_Identity=27.1276595744681, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17550688, Length=213, Percent_Identity=25.3521126760563, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320432, Length=213, Percent_Identity=39.4366197183099, Blast_Score=165, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6321018, Length=209, Percent_Identity=36.3636363636364, Blast_Score=125, Evalue=5e-30, Organism=Drosophila melanogaster, GI22026816, Length=208, Percent_Identity=41.8269230769231, Blast_Score=171, Evalue=2e-43, Organism=Drosophila melanogaster, GI17737899, Length=199, Percent_Identity=37.6884422110553, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI24645822, Length=199, Percent_Identity=37.6884422110553, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI221459597, Length=205, Percent_Identity=28.2926829268293, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356893, Length=205, Percent_Identity=28.2926829268293, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24663208, Length=201, Percent_Identity=25.8706467661692, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17647141, Length=201, Percent_Identity=25.8706467661692, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_GEOBB (B5EFS1)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137771.1 - ProteinModelPortal: B5EFS1 - SMR: B5EFS1 - GeneID: 6783796 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0954 - HOGENOM: HBG630208 - OMA: CGEGYHD - ProtClustDB: PRK00279 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 22404; Mature: 22404
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVP CCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH DEVVIGIVEERLAQADCQKGFILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGEL HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHEEECCCHHHH LKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQREDDKEETILNRLAVYEAQTA HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCC PLIAYYQAAGLLRSVDGLGTVEGVQSGILAAIRA CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVP CCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH DEVVIGIVEERLAQADCQKGFILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGEL HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHEEECCCHHHH LKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQREDDKEETILNRLAVYEAQTA HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCC PLIAYYQAAGLLRSVDGLGTVEGVQSGILAAIRA CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA