| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is map [H]
Identifier: 308535202
GI number: 308535202
Start: 1108707
End: 1109453
Strand: Direct
Name: map [H]
Synonym: NA
Alternate gene names: 308535202
Gene position: 1108707-1109453 (Clockwise)
Preceding gene: 197117344
Following gene: 197117346
Centisome position: 24.02
GC content: 61.98
Gene sequence:
>747_bases GTGATCGTACTAAAGTCCCCGGCTGAGATCGAGAAGATGGCGGCTGCCGGAAGGATCGTAGCGGAGATCCTGGCCGGGCT CAGGGAAAAAGTGGTGCCGGGGGTTACCCTGGCACAACTTGACGCATTCGCGGAGAGGGAAACGCTGAAGAGGAAGGCGA AGCCAGCCTTCAAGGGTTACAGCGGCTTCCCCTTTTCGCTTTGTTGCTCGGTGAACGAGCAGGTGGTTCATGGGTTTGCC ACGCAGCGCGTCCTGGTCTCAGGCGACATCGTCAGTTTAGACTTCGGAGTCGTCTACGGCGGCTATTACGGCGATTCGGC GATCACGGTTCCGGTGGGCGAGATATCGCAGGCCGCGGCCAAGCTGATCAAGGTCACCGAGGAGTCGCTCTACAAGGCGA TCGAGGTCGCTGACGCCTCGCACCGCCTCTCGGACGTCTCCCACGCGGTGCAGGCCTATGTCGAGGCGCGCGGCTTTTCC GTGGTGCGCGACTTTGTCGGGCACGGCATCGGCAAGGAACTGCACGAGGGGCCGCAGATCCCCAACTTCGGCGTTGCCGG AAAGGGGCCCAAGCTGAAGCCGGGCATGGTGCTCGCCATCGAGCCCATGATCAACGAAAAGGGATACGACGTGCGGGTGC TGGAGGACGGCTGGACCGCGGTCACCGCGGATGGCGGGCTCTCGGCGCACTTCGAGCACACGGTGGCAGTAACGGACAAC GGTCCGTTGATACTTACACAAATTTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
NA
Sequences:
>Translated_248_residues MIVLKSPAEIEKMAAAGRIVAEILAGLREKVVPGVTLAQLDAFAERETLKRKAKPAFKGYSGFPFSLCCSVNEQVVHGFA TQRVLVSGDIVSLDFGVVYGGYYGDSAITVPVGEISQAAAKLIKVTEESLYKAIEVADASHRLSDVSHAVQAYVEARGFS VVRDFVGHGIGKELHEGPQIPNFGVAGKGPKLKPGMVLAIEPMINEKGYDVRVLEDGWTAVTADGGLSAHFEHTVAVTDN GPLILTQI >Mature_248_residues MIVLKSPAEIEKMAAAGRIVAEILAGLREKVVPGVTLAQLDAFAERETLKRKAKPAFKGYSGFPFSLCCSVNEQVVHGFA TQRVLVSGDIVSLDFGVVYGGYYGDSAITVPVGEISQAAAKLIKVTEESLYKAIEVADASHRLSDVSHAVQAYVEARGFS VVRDFVGHGIGKELHEGPQIPNFGVAGKGPKLKPGMVLAIEPMINEKGYDVRVLEDGWTAVTADGGLSAHFEHTVAVTDN GPLILTQI
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=246, Percent_Identity=40.2439024390244, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI40385867, Length=249, Percent_Identity=36.5461847389558, Blast_Score=159, Evalue=2e-39, Organism=Escherichia coli, GI1786364, Length=247, Percent_Identity=42.1052631578947, Blast_Score=205, Evalue=2e-54, Organism=Escherichia coli, GI1788728, Length=210, Percent_Identity=26.6666666666667, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71996291, Length=240, Percent_Identity=36.6666666666667, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323273, Length=239, Percent_Identity=40.5857740585774, Blast_Score=174, Evalue=1e-44, Organism=Drosophila melanogaster, GI21355531, Length=239, Percent_Identity=39.3305439330544, Blast_Score=175, Evalue=2e-44, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=35.655737704918, Blast_Score=172, Evalue=2e-43,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 26375; Mature: 26375
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLKSPAEIEKMAAAGRIVAEILAGLREKVVPGVTLAQLDAFAERETLKRKAKPAFKGY CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SGFPFSLCCSVNEQVVHGFATQRVLVSGDIVSLDFGVVYGGYYGDSAITVPVGEISQAAA CCCCCEEEECCCHHHHHHHHHCEEEEECCEEEEEECEEECCEECCCEEEEEHHHHHHHHH KLIKVTEESLYKAIEVADASHRLSDVSHAVQAYVEARGFSVVRDFVGHGIGKELHEGPQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCC PNFGVAGKGPKLKPGMVLAIEPMINEKGYDVRVLEDGWTAVTADGGLSAHFEHTVAVTDN CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEEEEEEEEEEECC GPLILTQI CCEEEEEC >Mature Secondary Structure MIVLKSPAEIEKMAAAGRIVAEILAGLREKVVPGVTLAQLDAFAERETLKRKAKPAFKGY CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SGFPFSLCCSVNEQVVHGFATQRVLVSGDIVSLDFGVVYGGYYGDSAITVPVGEISQAAA CCCCCEEEECCCHHHHHHHHHCEEEEECCEEEEEECEEECCEECCCEEEEEHHHHHHHHH KLIKVTEESLYKAIEVADASHRLSDVSHAVQAYVEARGFSVVRDFVGHGIGKELHEGPQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCC PNFGVAGKGPKLKPGMVLAIEPMINEKGYDVRVLEDGWTAVTADGGLSAHFEHTVAVTDN CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEEEEEEEEEEECC GPLILTQI CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842; 7559358 [H]